Tableau information
Concept source: d4kaxa_ amino acid (a.a.) range (ILE96)(GLY140)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE96) (ASP109) H1
(ILE116) (ASN122) E2
(LYS131) (GLY140) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 163.4° E2
H3 -64.7° 122.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2b2nb_ : (ALA26) (THR63) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
d2bp7b1 : (SER61) (ALA92) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |automated matches |Pseudomonas putida [TaxId: 303]
d2f48a_ : (GLY219) (THR266) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |automated matches |Borrelia burgdorferi [TaxId: 224326]
d3zlfa2 : (GLY214) (GLY264) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
d2f48b_ : (GLY219) (THR266) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |automated matches |Borrelia burgdorferi [TaxId: 224326]
d3dufb1 : (GLU59) (MET90) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus stearothermophilus [TaxId: 1422]
d4jdya_ : (LEU137) (SER181) [view usage] : c.1.2.6 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |PdxS-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1rpaa_ : (GLY229) (LEU268) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2nrbb1 : (ASP260) (ILE294) [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |Succinate:CoA transferase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1dtwb1 : (GLU76) (ALA106) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |Branched-chain alpha-keto acid dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d4hhma_ : (ARG266) (ALA322) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces sp. [TaxId: 253732]
d1v3aa_ : (PRO76) (SER122) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Protein tyrosine phosphatase type IVa |Human (Homo sapiens), pr-3 [TaxId: 9606]
d2ebfx2 : (GLY1020) (ASN1047) [view usage] : c.150.1.2 |EreA/ChaN-like |EreA/ChaN-like |PMT domain-like |Dermonecrotic toxin, ToxA |Pasteurella multocida [TaxId: 747]
d2grja_ : (HIS84) (GLY113) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Thermotoga maritima [TaxId: 2336]
d2pb9a1 : (LYS269) (ALA315) [view usage] : c.74.1.2 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |Phosphomethylpyrimidine kinase C-terminal domain-like |Phosphomethylpyrimidine kinase |Pyrococcus furiosus [TaxId: 2261]
d1m8q0_ : (PRO112) (GLY146) [view usage] : i.15.1.1 |Muscle protein complexes |Muscle protein complexes |Muscle protein complexes |Averaged rigor crossbridges from tomograms of insect flight muscle |Chicken (Gallus gallus) and Rabbit (Oryctolagus cuniculus) [TaxId: 9031]
d2qjia_ : (ILE47) (HIS71) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d1dida_ : (LEU264) (ASP328) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Arthrobacter, strain b3728 [TaxId: 1663]
d1kzha_ : (GLY219) (THR266) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |Pyrophosphate-dependent phosphofructokinase |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d1w85b1 : (ALA58) (GLU88) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d1u5bb1 : (CYS75) (ALA106) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |Branched-chain alpha-keto acid dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d8gpba_ : (GLU290) (ILE346) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2o2sa_ : (SER263) (MET295) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Toxoplasma gondii [TaxId: 383379]
d1ebba_ : (PHE123) (ASP164) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Broad specificity phosphatase PhoE (YhfR) |Bacillus stearothermophilus [TaxId: 1422]
d3bbop1 : (PRO102) (ALA132) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d3qvqd_ : (GLU220) (ILE246) [view usage] : c.1.18.0 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d2acfd_ : (LYS317) (ASN353) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |Sars coronavirus tor2 [TaxId: 227984]
d1nd6b_ : (GLY1228) (ASP1268) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Human (Homo sapiens) [TaxId: 9606]
d2gg4a_ : (CYS103) (ARG128) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d2acfa1 : (PRO318) (LEU351) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |Replicase polyprotein 1ab |SARS coronavirus [TaxId: 227859]
d3tozb1 : (LEU55) (LEU84) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d1jr2a_ : (HIS173) (TYR203) [view usage] : c.113.1.1 |HemD-like |HemD-like |HemD-like |Uroporphyrinogen III synthase (U3S, HemD) |Human (Homo sapiens) [TaxId: 9606]
d3kvta_ : (THR34) (GLY72) [view usage] : d.42.1.2 |POZ domain |POZ domain |Tetramerization domain of potassium channels |akv3.1 voltage-gated potassium channel |California sea hare (Aplysia californica) [TaxId: 6500]
d1h2ea_ : (PHE123) (ASP164) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Broad specificity phosphatase PhoE (YhfR) |Bacillus stearothermophilus [TaxId: 1422]
d1fp7b_ : (SER1284) (GLY1322) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Formyltetrahydrofolate synthetase |Moorella thermoacetica [TaxId: 1525]
d3sdkf_ : (SER185) (ASN241) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1px8a2 : (ASP171) (GLU217) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-D-xylosidase, catalytic domain |Thermoanaerobacterium saccharolyticum [TaxId: 28896]
d3vpea_ : (ILE81) (THR104) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Serratia marcescens [TaxId: 615]
d4lnca_ : (LEU265) (ALA322) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1a0da_ : (LEU312) (ARG374) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Bacillus stearothermophilus [TaxId: 1422]
d3zlfc2 : (GLY214) (GLY264) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.68, c.2, i.1, d.157, c.124, c.45, c.113, c.74, c.37, c.36, i.15, c.89, d.153, c.87, c.60, c.50, c.58, d.42, c.150