Tableau information
Concept source: d1orra_ amino acid (a.a.) range (GLN113)(GLY184)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN113) (ASN119) H1
(ASN119) (THR125) E2
(SER163) (GLY184) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -78.3° E2
H3 -93.8° -154.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4nr0a_ : (GLY2) (GLY32) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2ow6a3 : (GLU143) (ASN194) [view usage] : c.6.2.1 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |alpha-mannosidase |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2bm7c_ : (PRO151) (GLY177) [view usage] : b.80.8.1 |Single-stranded right-handed beta-helix |Pentapeptide repeat-like |Pentapeptide repeats |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2dbsa1 : (ARG7) (MSE53) [view usage] : d.374.1.1 |TTHC002-like |TTHC002-like |TTHC002-like |Hypothetical protein TTHC002 |Thermus thermophilus [TaxId: 274]
d2bm7b_ : (ASP150) (GLY177) [view usage] : b.80.8.1 |Single-stranded right-handed beta-helix |Pentapeptide repeat-like |Pentapeptide repeats |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1dy2a_ : (ARG134) (SER160) [view usage] : d.169.1.5 |C-type lectin-like |C-type lectin-like |Endostatin |Endostatin domain of collagen alpha1(xv) |Mouse (Mus musculus) [TaxId: 10090]
d1l9mb4 : (ALA299) (VAL326) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d4erib_ : (SER259) (VAL283) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d2rbeb_ : (PRO29) (GLY58) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
d1asta_ : (ARG106) (ASP129) [view usage] : d.92.1.8 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Astacin |Astacin |European fresh water crayfish (Astacus astacus) [TaxId: 6715]
d1mbmb_ : (THR159) (ILE197) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NSP4 proteinase |Equine arteritis virus, EAV [TaxId: 11047]
d3abaa_ : (ILE25) (ASP60) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces avermitilis [TaxId: 33903]
d2aama1 : (GLY213) (GLY254) [view usage] : c.1.8.15 |TIM beta/alpha-barrel |(Trans)glycosidases |TM1410-like |Hypothetical protein TM1410 |Thermotoga maritima [TaxId: 2336]
d3s4tb_ : (ILE249) (GLU276) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d2bm5b_ : (PRO151) (GLY177) [view usage] : b.80.8.1 |Single-stranded right-handed beta-helix |Pentapeptide repeat-like |Pentapeptide repeats |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1h6ua2 : (GLN72) (LEU97) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |Internalin H |Listeria monocytogenes [TaxId: 1639]
d2hbvb_ : (SER259) (VAL283) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d2p4qa1 : (GLY130) (SER160) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2dvtb_ : (ARG248) (GLU276) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |Thermophilic reversible gamma-resorcylate decarboxylase |Rhizobium sp. MTP-10005 [TaxId: 267998]
d1h76a2 : (ASN446) (ASN478) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Pig (Sus scrofa) [TaxId: 9823]
d3s4ta_ : (ILE249) (GLU276) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d2aamc_ : (GLY213) (LYS253) [view usage] : c.1.8.15 |TIM beta/alpha-barrel |(Trans)glycosidases |TM1410-like |Hypothetical protein TM1410 |Thermotoga maritima [TaxId: 2336]
d4nr0c_ : (GLY2) (GLY32) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d4qs5c_ : (ILE276) (GLY305) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.1, c.10, c.94, a.104, c.2, c.6, b.47, d.92, d.169, d.3, d.374