Tableau information
Concept source: d3ubmc_ amino acid (a.a.) range (VAL25)(ASN70)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL25) (GLY36) H1
(ASP38) (ARG44) E2
(LEU64) (ASN70) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -152.1° E2
H3 -46.6° 146.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4nf8b_ : (VAL197) (ASP226) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1vmia_ : (PRO103) (GLY139) [view usage] : c.77.1.5 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Phosphotransacetylase |Ethanolamine utilization protein EutD |Escherichia coli [TaxId: 562]
d1bg2a_ : (SER57) (GLU96) [view usage] : c.37.1.9 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Motor proteins |Kinesin |Human (Homo sapiens) [TaxId: 9606]
d1j8fc_ : (THR146) (GLY177) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |Sirt2 histone deacetylase |Human (Homo sapiens) [TaxId: 9606]
d1ny5b2 : (SER143) (SER184) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Transcriptional activator sigm54 (NtrC1), C-terminal domain |Aquifex aeolicus [TaxId: 63363]
d1c8ua1 : (SER2) (VAL51) [view usage] : d.38.1.3 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |Acyl-CoA thioesterase |Thioesterase II (TesB) |Escherichia coli [TaxId: 562]
d1fuia2 : (ASP313) (GLY354) [view usage] : c.85.1.1 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |L-fucose isomerase, N-terminal and second domains |L-fucose isomerase, N-terminal and second domains |Escherichia coli [TaxId: 562]
d3hqda_ : (LYS77) (GLU116) [view usage] : c.37.1.9 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Motor proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1svla_ : (LYS400) (LEU442) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Papillomavirus large T antigen helicase domain |Simian virus 40 [TaxId: 10633]
d1nmua_ : (ASP209) (LYS239) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1veca_ : (LEU194) (GLY222) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEAD box RNA helicase rck/p54 |Human (Homo sapiens) [TaxId: 9606]
d3ktna_ : (GLY33) (GLY72) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
d2xd2b_ : (LYS83) (GLY111) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d3rana_ : (PHE138) (GLY170) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Dog (Canis familiaris) [TaxId: 9615]
d1oaoa_ : (ALA624) (ARG665) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit |Moorella thermoacetica [TaxId: 1525]
d3ntya_ : (ARG66) (LEU106) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uaaa1 : (GLY6) (GLY44) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEXX box DNA helicase |Escherichia coli, RepD [TaxId: 562]
d1m74a3 : (PHE82) (SER110) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Translocation ATPase SecA, nucleotide-binding domains |Bacillus subtilis [TaxId: 1423]
d2p6ra4 : (LYS230) (TYR269) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Hel308 helicase |Archaeoglobus fulgidus [TaxId: 2234]
d1de5b_ : (GLU312) (GLU363) [view usage] : c.1.15.2 |TIM beta/alpha-barrel |Xylose isomerase-like |L-rhamnose isomerase |L-rhamnose isomerase |Escherichia coli [TaxId: 562]
d2ayqb_ : (LEU220) (SER253) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Bacillus coagulans [TaxId: 1398]
d3inlb_ : (MET283) (ARG329) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d3rhla_ : (LEU688) (MET734) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3cyva_ : (ALA313) (ARG354) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Shigella flexneri [TaxId: 623]
d3apya_ : (VAL258) (GLY288) [view usage] : c.1.23.1 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Methylenetetrahydrofolate reductase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d4hnak_ : (SER57) (MET95) [view usage] : c.37.1.9 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Motor proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3szya_ : (THR112) (LEU137) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1grqa_ : (PRO66) (GLY110) [view usage] : c.37.1.3 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Chloramphenicol phosphotransferase |Chloramphenicol phosphotransferase |Streptomyces venezuelae [TaxId: 54571]
d1c4aa1 : (MET211) (GLY261) [view usage] : c.96.1.1 |Fe-only hydrogenase |Fe-only hydrogenase |Fe-only hydrogenase |Fe-only hydrogenase, catalytic domain |Clostridium pasteurianum [TaxId: 1501]
d3t02a_ : (THR112) (LYS139) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3tvta2 : (SER863) (GLN893) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1hqca2 : (GLN17) (GLY63) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Holliday junction helicase RuvB |Thermus thermophilus [TaxId: 274]
d1mjga_ : (ALA624) (ARG665) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit |Moorella thermoacetica [TaxId: 1525]
d1qhna_ : (PRO66) (GLY110) [view usage] : c.37.1.3 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Chloramphenicol phosphotransferase |Chloramphenicol phosphotransferase |Streptomyces venezuelae [TaxId: 54571]
d1qm9a1 : (GLY87) (LYS106) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Polypyrimidine tract-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1fnna2 : (GLY33) (TYR67) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |CDC6, N-domain |Pyrobaculum aerophilum [TaxId: 13773]
d1euha_ : (LEU265) (LEU311) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Streptococcus mutans [TaxId: 1309]
d3k2wd_ : (LEU270) (LYS308) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
d1pota_ : (SER61) (GLY94) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Spermidine/putrescine-binding protein PotD |Escherichia coli [TaxId: 562]
d3zgoc_ : (THR146) (GLY177) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2id2c_ : (LEU265) (LEU311) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Streptococcus mutans [TaxId: 1309]
d3rhja_ : (LEU688) (MET734) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3pzua_ : (LYS142) (ILE191) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.123, c.94, c.76, d.58, c.82, c.77, c.72, c.37, c.31, c.85, d.38, e.26, c.96