Tableau information
Concept source: d1ykwa1 amino acid (a.a.) range (LEU246)(GLY269)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU246) (GLY257) H1
(ASN259) (ASN264) E2
(ASN264) (GLY269) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 144.9° E2
H3 -148.5° 64.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4hl2a_ : (ASP225) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2vpqa1 : (ALA88) (ILE114) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1ga0a_ : (PRO192) (GLY225) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
d3spud_ : (ASP225) (LEU272) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d4hl1b_ : (ASP225) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1ni0c_ : (GLU116) (GLU151) [view usage] : c.52.1.6 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease PvuII |Restriction endonuclease PvuII |Proteus vulgaris [TaxId: 585]
d4rawa_ : (ASP225) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2dawa1 : (VAL12) (GLY53) [view usage] : d.20.1.3 |UBC-like |UBC-like |RWD domain |RWD domain-containing protein 2 |Human (Homo sapiens) [TaxId: 9606]
d3sbla_ : (ASP225) (ASP267) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1aora2 : (SER34) (THR69) [view usage] : d.152.1.1 |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase |Pyrococcus furiosus [TaxId: 2261]
d1ykwa1 : (LEU246) (GLY269) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Chlorobium tepidum [TaxId: 1097]
d4c3za_ : (SER769) (VAL798) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pvia_ : (GLU116) (GLU151) [view usage] : c.52.1.6 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease PvuII |Restriction endonuclease PvuII |Proteus vulgaris [TaxId: 585]
d2ljza_ : (TYR84) (LYS122) [view usage] : g.90.1.1 |E6 C-terminal domain-like |E6 C-terminal domain-like |E6 C-terminal domain-like |automated matches |Human papillomavirus [TaxId: 333760]
d4h0da_ : (ASP225) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1kd0a1 : (GLU209) (PHE247) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |beta-Methylaspartase |Clostridium tetanomorphum [TaxId: 1553]
d3hsda_ : (ARG121) (THR149) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Escherichia coli [TaxId: 562]
d2ym0b_ : (GLU133) (GLN207) [view usage] : a.250.1.0 |IpaD-like |IpaD-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d1r0va3 : (SER182) (VAL212) [view usage] : d.75.1.1 |MutS N-terminal domain-like |tRNA-intron endonuclease N-terminal domain-like |tRNA-intron endonuclease N-terminal domain-like |Dimeric tRNA splicing endonuclease, domains 1 and 3 |Archaeoglobus fulgidus [TaxId: 2234]
d1bccd2 : (ASP22) (VAL54) [view usage] : a.3.1.3 |Cytochrome c |Cytochrome c |Cytochrome bc1 domain |Cytochrome bc1 domain |Chicken (Gallus gallus) [TaxId: 9031]
d2jpta_ : (LYS59) (TRP90) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Cow (Bos taurus), s100b [TaxId: 9913]
d4gyua_ : (THR226) (ASP267) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d4k8oa_ : (SER621) (ALA651) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3r9va_ : (SER130) (PRO210) [view usage] : a.250.1.1 |IpaD-like |IpaD-like |IpaD-like |automated matches |Shigella flexneri [TaxId: 623]
d1hq2a_ : (ARG121) (THR149) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Escherichia coli [TaxId: 562]
d4fdma_ : (SER58) (HIS85) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Bacillus sp. [TaxId: 307644]
d1ulza2 : (ASN87) (GLY113) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Biotin carboxylase (BC), N-terminal domain |Aquifex aeolicus [TaxId: 63363]
d3sfpa_ : (ASP225) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d4exsa_ : (THR226) (VAL272) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1zpvb_ : (ASP55) (GLU83) [view usage] : d.58.18.7 |Ferredoxin-like |ACT-like |SP0238-like |UPF0237 protein SP0238 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2daxa1 : (GLU8) (LYS48) [view usage] : d.20.1.3 |UBC-like |UBC-like |RWD domain |Uncharacterized protein C21orf6 |Human (Homo sapiens) [TaxId: 9606]
d3hd2a_ : (ARG121) (ALA151) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Escherichia coli K-12 [TaxId: 83333]
d1yopa1 : (TYR35) (ALA71) [view usage] : g.41.17.1 |Rubredoxin-like |CSL zinc finger |CSL zinc finger |Diphthamide biosynthesis protein 3, DPH3 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4dika1 : (TYR208) (GLY249) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |automated matches |Thermotoga maritima [TaxId: 2336]
d2cbza_ : (SER769) (VAL798) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hcxa_ : (ARG121) (ALA151) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Escherichia coli K-12 [TaxId: 83333]
d1vr9a3 : (ASN78) (LEU120) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Hypothetical protein TM0892, CBS tandem |Thermotoga maritima [TaxId: 2336]
d1ni0a_ : (GLU121) (HIS152) [view usage] : c.52.1.6 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease PvuII |Restriction endonuclease PvuII |Proteus vulgaris [TaxId: 585]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, c.69, d.58, d.157, c.37, d.20, d.37, c.52, a.39, a.3, c.30, g.41, a.250, d.152, g.90, d.75