Tableau information
Concept source: d1zbsa2 amino acid (a.a.) range (THR71)(GLY107)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR71) (LEU86) H1
(ASP90) (ALA95) E2
(ASP97) (GLY107) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 149.2° E2
H3 -83.4° 97.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yaaa_ : (ASP351) (ALA378) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]
d1bev3_ : (LEU43) (ILE69) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Bovine enterovirus coat proteins |Bovine enterovirus, VG-5-27 [TaxId: 12064]
d3dv2a_ : (TYR84) (TYR112) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1n3bb_ : (PRO78) (SER119) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Escherichia coli [TaxId: 562]
d4cqmj_ : (THR206) (LEU237) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1yf5l2 : (ASP114) (ILE142) [view usage] : c.55.1.11 |Ribonuclease H-like motif |Actin-like ATPase domain |Cyto-EpsL domain |Cytoplasmic domain of general secretion pathway protein L, EpsL |Vibrio cholerae [TaxId: 666]
d3v7ta_ : (ALA57) (ASP84) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |beta-Tryptase |Human (Homo sapiens) [TaxId: 9606]
d1d4m3_ : (LEU43) (ARG69) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Human enterovirus B coat proteins |Human coxsackievirus A9 [TaxId: 12067]
d2beld_ : (LYS238) (GLU277) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
d1s1hb_ : (GLY104) (ALA129) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1c0aa2 : (THR330) (ILE364) [view usage] : d.74.4.1 |DCoH-like |GAD domain-like |GAD domain |Prokaryotic AspRS, insert domain |Escherichia coli [TaxId: 562]
d1woqa1 : (ASP105) (GLY135) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Inorganic polyphosphate/ATP-glucomannokinase PPGMK |Arthrobacter sp. KM [TaxId: 184230]
d2zkrs1 : (THR83) (LEU116) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Dog (Canis familiaris) [TaxId: 9615]
d1llfa_ : (PRO135) (LEU164) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Type-B carboxylesterase/lipase |Candida cylindracea, cholesterol esterase [TaxId: 44322]
d4nbub_ : (THR119) (TYR150) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus sp. [TaxId: 161544]
d2assa1 : (SER1024) (HIS1059) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |Cyclin A/CDK2-associated p45, Skp1 |Human (Homo sapiens) [TaxId: 9606]
d2bh1a2 : (ASP114) (ILE142) [view usage] : c.55.1.11 |Ribonuclease H-like motif |Actin-like ATPase domain |Cyto-EpsL domain |automated matches |Vibrio cholerae [TaxId: 666]
d1upba1 : (TYR251) (ASN277) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d3lm9a1 : (PRO85) (PHE114) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Putative fructokinase YhdR |Bacillus subtilis [TaxId: 1423]
d1bdga1 : (VAL185) (LEU219) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Hexokinase |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d2hdoa1 : (ILE87) (SER113) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |Phosphoglycolate phosphatase |Lactobacillus plantarum [TaxId: 1590]
d2ihua2 : (ILE145) (SER175) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d1fqvb2 : (SER24) (HIS65) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |Cyclin A/CDK2-associated p45, Skp1 |Human (Homo sapiens) [TaxId: 9606]
d1us2a2 : (HIS250) (ASN278) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase 10c |Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
d1udea_ : (ALA128) (TYR171) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Pyrococcus horikoshii [TaxId: 53953]
d3ii0a_ : (ASN352) (HIS379) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wdaa3 : (HIS444) (LEU476) [view usage] : d.126.1.5 |Pentein, beta/alpha-propeller |Pentein |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1e4ft1 : (PRO166) (VAL198) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Cell division protein FtsA |Thermotoga maritima [TaxId: 2336]
d2ap1a2 : (ALA90) (ASP116) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Putative regulator protein YcfX |Salmonella typhimurium [TaxId: 90371]
d2fr0a1 : (PRO1866) (ALA1900) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Erythromycin synthase, eryAI, 1st ketoreductase module |Saccharopolyspora erythraea [TaxId: 1836]
d3rija_ : (SER4) (VAL41) [view usage] : d.116.1.0 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d4a17r_ : (THR77) (LEU110) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1e4gt1 : (LYS168) (GLY197) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Cell division protein FtsA |Thermotoga maritima [TaxId: 2336]
d4phtx1 : (ASP114) (LEU142) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
d2x06a_ : (GLU305) (GLY336) [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase |Methanococcus jannaschii [TaxId: 2190]
d1q18a1 : (SER82) (LEU111) [view usage] : c.55.1.7 |Ribonuclease H-like motif |Actin-like ATPase domain |Glucokinase |Glucokinase Glk |Escherichia coli [TaxId: 562]
d3fsla_ : (ASP351) (GLY378) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aromatic aminoacid aminotransferase, AroAT |Escherichia coli K-12 [TaxId: 83333]
d1upaa1 : (TYR251) (ASN277) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d3ri0a_ : (SER4) (GLY42) [view usage] : d.116.1.0 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2bela_ : (LYS238) (ILE268) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
d1nikc_ : (SER204) (ASP266) [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |Complete 12-subunit RNA polymerase II complex |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3umgb_ : (TRP118) (ASN151) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d3iucc2 : (PRO369) (GLY407) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nvmb2 : (CYS132) (GLY165) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Acetaldehyde dehydrogenase (acylating) |Pseudomonas sp. [TaxId: 306]
d2z6ua_ : (SER96) (HIS127) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |DNA methylase HhaI |Haemophilus parahaemolyticus [TaxId: 735]
d2z6ua_ : (ASN131) (GLY158) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |DNA methylase HhaI |Haemophilus parahaemolyticus [TaxId: 735]
d3dnfb_ : (PRO77) (GLY113) [view usage] : c.155.1.1 |LytB-like |LytB-like |LytB-like |LytB |Aquifex aeolicus [TaxId: 63363]
d3ls6b_ : (ALA185) (HIS212) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |automated matches |Salmonella typhimurium [TaxId: 90371]
d1p22b2 : (SER24) (HIS59) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |Cyclin A/CDK2-associated p45, Skp1 |Human (Homo sapiens) [TaxId: 9606]
d3owoa_ : (SER18) (GLY46) [view usage] : e.22.1.0 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
d1a4yb_ : (ASP22) (ASN59) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d1edga_ : (GLY212) (THR232) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase CelA |Clostridium cellulolyticum [TaxId: 1521]
d3tria1 : (PRO104) (VAL127) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d2v4mc_ : (ARG403) (ARG425) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3j39x_ : (THR204) (ASP239) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d1al23_ : (MET43) (VAL70) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d4kwib_ : (PRO221) (GLY253) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Streptomyces cyanogenus [TaxId: 80860]
d3fdea_ : (THR595) (GLU623) [view usage] : b.122.1.12 |PUA domain-like |PUA domain-like |SRA domain-like |E3 ubiquitin-protein ligase UHRF1 |Mouse (Mus musculus) [TaxId: 10090]
d1t3ha_ : (GLU80) (SER119) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Escherichia coli [TaxId: 562]
d1n8pa_ : (ASP156) (SER187) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystathionine gamma-lyase (CYS3) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1jj2r_ : (THR11) (TYR45) [view usage] : d.12.1.1 |Ribosomal proteins S24e, L23 and L15e |Ribosomal proteins S24e, L23 and L15e |L23p |Ribosomal protein L23 |Haloarcula marismortui [TaxId: 2238]
d2o3ba1 : (PRO55) (GLY89) [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Nuclease NucA |Nostoc sp. PCC 7120 [TaxId: 103690]
d1w2br_ : (GLU12) (ASP46) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Haloarcula marismortui [TaxId: 2238]
d1xc3a1 : (PRO85) (PHE114) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Putative fructokinase YhdR |Bacillus subtilis [TaxId: 1423]
d3l2oa1 : (SER1024) (HIS1065) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4a17d_ : (ARG92) (GLY113) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.69, c.2, i.1, c.108, c.26, b.47, c.66, c.80, e.22, b.40, c.37, c.36, c.55, b.121, d.81, c.31, b.122, d.126,
d.116, c.122, d.5, d.74, d.42, i.8, d.4, c.155, d.12, d.115