Tableau information
Concept source: d1g64a_ amino acid (a.a.) range (LYS41)(GLY81)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS41) (GLY56) H1
(ASN58) (PHE64) E2
(ASN71) (GLY81) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -159.9° E2
H3 17.7° -148.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4iyjb_ : (ASN27) (ASP63) [view usage] : c.23.10.0 |Flavodoxin-like |SGNH hydrolase |automated matches |automated matches |Bacteroides uniformis [TaxId: 411479]
d1xfka_ : (PHE180) (GLY218) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Formimidoylglutamase HutG |Vibrio cholerae [TaxId: 666]
d2iiqa_ : (ARG186) (ALA219) [view usage] : c.87.1.9 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Sialyltransferase-like |Alpha-2,3/2,6-sialyltransferase/sialidase |Pasteurella multocida [TaxId: 747]
d2ex0b_ : (ARG186) (ALA219) [view usage] : c.87.1.9 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Sialyltransferase-like |Alpha-2,3/2,6-sialyltransferase/sialidase |Pasteurella multocida [TaxId: 747]
d1k5dc_ : (THR46) (LEU91) [view usage] : c.10.1.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Rna1p (RanGAP1), N-terminal domain |Rna1p (RanGAP1), N-terminal domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1rkba_ : (ASP66) (HIS90) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]
d3ea1a_ : (SER244) (LEU295) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |automated matches |Bacillus thuringiensis [TaxId: 1428]
d4ppya_ : (ASN33) (TRP65) [view usage] : c.23.10.0 |Flavodoxin-like |SGNH hydrolase |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d4i1ub_ : (GLU77) (ARG123) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
d2c83a_ : (ARG186) (LEU218) [view usage] : c.87.1.9 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Sialyltransferase-like |automated matches |Pasteurella multocida [TaxId: 747]
d2or2a_ : (SER244) (LEU295) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |automated matches |Bacillus thuringiensis [TaxId: 1428]
d1t6ma_ : (ILE256) (ALA295) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |automated matches |Bacillus thuringiensis [TaxId: 1428]
d4kqob2 : (ALA363) (TYR407) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2bwob_ : (PRO340) (GLU371) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d4hgrf_ : (ALA108) (SER131) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d4lypa_ : (THR325) (SER412) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d2aamb_ : (SER269) (PRO311) [view usage] : c.1.8.15 |TIM beta/alpha-barrel |(Trans)glycosidases |TM1410-like |Hypothetical protein TM1410 |Thermotoga maritima [TaxId: 2336]
d3oojf2 : (ALA353) (SER385) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]
d2pbea1 : (ARG187) (LEU219) [view usage] : a.160.1.5 |PAP/OAS1 substrate-binding domain |PAP/OAS1 substrate-binding domain |AadK C-terminal domain-like |Aminoglycoside 6-adenylyltransferase AadK |Bacillus subtilis [TaxId: 1423]
d1yrga_ : (THR46) (LEU91) [view usage] : c.10.1.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Rna1p (RanGAP1), N-terminal domain |Rna1p (RanGAP1), N-terminal domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1io0a_ : (VAL183) (LYS221) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Tropomodulin C-terminal domain |Chicken (Gallus gallus) [TaxId: 9031]
d4peqd_ : (CYS382) (GLN419) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Cow (Bos taurus) [TaxId: 9913]
d2rbca_ : (ALA47) (GLY84) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d2ifga3 : (SER131) (GLY166) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |High affinity nerve growth factor receptor, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d4dc3b_ : (GLY64) (LYS99) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d1q50a_ : (TYR444) (MET487) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1xxha2 : (TYR5) (GLN45) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |delta subunit of DNA polymerase III, N-domain |Escherichia coli [TaxId: 562]
d1hfbh_ : (ASN291) (ASN368) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId: 4932]
d4hgod_ : (ALA108) (SER131) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d3qusa_ : (VAL19) (LEU51) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d1d06a_ : (LEU143) (GLN169) [view usage] : d.110.3.2 |Profilin-like |PYP-like sensor domain (PAS domain) |Heme-binding PAS domain |Histidine kinase FixL heme domain |Rhizobium meliloti [TaxId: 382]
d2afke_ : (ALA98) (ALA136) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d4hgra_ : (ALA108) (SER131) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d3s44a_ : (ARG186) (ALA219) [view usage] : c.87.1.9 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Sialyltransferase-like |automated matches |Pasteurella multocida [TaxId: 747]
d2vhla2 : (VAL238) (ALA270) [view usage] : c.1.9.10 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain |N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain |Bacillus subtilis [TaxId: 1423]
d4kqoa2 : (ALA363) (TYR407) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d4lyqa_ : (THR325) (LYS413) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d1jj7a_ : (SER644) (LEU685) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Peptide transporter Tap1, C-terminal ABC domain |Human (Homo sapiens) [TaxId: 9606]
d2yb6a_ : (THR3) (TRP36) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Human (Homo sapiens), ubc2b [TaxId: 9606]
d3in1a_ : (ASP43) (ASN81) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1pgva_ : (ASP223) (SER264) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Tropomodulin C-terminal domain |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1pgva_ : (MET345) (GLY387) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Tropomodulin C-terminal domain |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1dppa_ : (ASP221) (ASP251) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Dipeptide-binding protein |Escherichia coli [TaxId: 562]
d3szaa_ : (LEU396) (SER422) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fe8a_ : (ILE1007) (ARG1056) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d4nr3b_ : (PRO5) (TYR34) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ex0a1 : (ARG186) (ALA219) [view usage] : c.87.1.9 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Sialyltransferase-like |Alpha-2,3/2,6-sialyltransferase/sialidase |Pasteurella multocida [TaxId: 747]
d1t9ab1 : (CYS357) (GLY399) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3tbfc_ : (ALA355) (SER387) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Francisella tularensis [TaxId: 119856]
d4kfqa_ : (MET109) (ILE135) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |N-methyl-D-aspartate receptor subunit 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1fe8c_ : (ILE1007) (ARG1056) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, c.10, c.67, c.94, c.108, c.82, c.80, c.42, c.72, c.23, c.37, c.87, c.31, c.62, d.20, d.110, a.160