Tableau information
Concept source: d1zh0a_ amino acid (a.a.) range (VAL146)(LEU183)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL146) (ASN157) H1
(ASP165) (GLY170) E2
(ARG174) (LEU183) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 144.7° E2
H3 -55.4° 157.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2gy9i1 : (GLN49) (ASP90) [view usage] : d.14.1.1 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Translational machinery components |Ribosomal protein S9 |Escherichia coli [TaxId: 562]
d4c7pa2 : (GLU303) (GLU347) [view usage] : d.129.9.1 |TBP-like |RalF, C-terminal domain |RalF, C-terminal domain |automated matches |Legionella pneumophila [TaxId: 272624]
d3bpma_ : (ASP32) (LYS69) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1ep1a_ : (LEU81) (ALA123) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d1qlwa_ : (LYS236) (GLY280) [view usage] : c.69.1.15 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |A novel bacterial esterase |A novel bacterial esterase |Alcaligenes sp. [TaxId: 512]
d1vl5a_ : (LEU31) (PHE60) [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical protein BH2331 |Bacillus halodurans [TaxId: 86665]
d2wkwa_ : (LYS236) (GLY280) [view usage] : c.69.1.15 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |A novel bacterial esterase |automated matches |Alcaligenes sp. [TaxId: 512]
d2ilxa_ : (PRO131) (GLY178) [view usage] : d.61.1.3 |LigT-like |LigT-like |2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain |2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3r5xa2 : (ILE47) (GLY78) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-Ala-D-Ala ligase, N-domain |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2p75b_ : (THR28) (GLY63) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d4a17l_ : (PRO45) (VAL110) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1tf7a1 : (GLY27) (ASP68) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Circadian clock protein KaiC |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d4o0mb1 : (PHE29) (ASN69) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1na6b1 : (SER141) (GLY170) [view usage] : b.142.1.1 |DNA-binding pseudobarrel domain |DNA-binding pseudobarrel domain |Type II restriction endonuclease effector domain |Restriction endonuclease EcoRII, N-terminal domain |Escherichia coli [TaxId: 562]
d2nn6b1 : (ASP92) (GLY149) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease RRP41 |Human (Homo sapiens) [TaxId: 9606]
d2a6pa_ : (ASP34) (GLY73) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3sr9a1 : (LEU1372) (TYR1405) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4o0ma1 : (GLY28) (ASN69) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d2nn6c1 : (GLY99) (VAL163) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease RRP43 |Human (Homo sapiens) [TaxId: 9606]
d2ywca1 : (ASP57) (GLY89) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GMP synthetase |Thermus thermophilus HB8 [TaxId: 300852]
d1tf7a2 : (ARG269) (LYS309) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Circadian clock protein KaiC |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d1o2da_ : (TYR82) (LYS112) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Alcohol dehydrogenase TM0920 |Thermotoga maritima [TaxId: 2336]
d4a17m_ : (SER94) (GLY170) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2i2to1 : (LYS68) (ALA113) [view usage] : c.55.4.1 |Ribonuclease H-like motif |Translational machinery components |Ribosomal protein L18 and S11 |Ribosomal protein L18 (L18p) |Escherichia coli [TaxId: 562]
d1i7pa2 : (ASN253) (GLY291) [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |cytochrome b5 reductase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2o26b_ : (SER71) (ALA132) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1qlwb_ : (LYS236) (GLY280) [view usage] : c.69.1.15 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |A novel bacterial esterase |A novel bacterial esterase |Alcaligenes sp. [TaxId: 512]
d1dl5a2 : (ASN214) (LEU246) [view usage] : d.197.1.1 |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d3lhla_ : (PHE198) (SER250) [view usage] : c.42.1.0 |Arginase/deacetylase |Arginase/deacetylase |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d2qzsa_ : (SER409) (SER443) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1b3ta_ : (ASN475) (ILE528) [view usage] : d.58.8.1 |Ferredoxin-like |Viral DNA-binding domain |Viral DNA-binding domain |Epstein barr virus nuclear antigen-1 (ebna1) |Epstein-Barr virus [TaxId: 10376]
d1yzga1 : (GLU71) (ALA111) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARL5B [TaxId: 9606]
d3d1ja_ : (SER409) (SER443) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3copa_ : (SER409) (PRO445) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2f4ma1 : (LEU361) (SER389) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Peptide:N-glycanase 1, PNG1 |Mouse (Mus musculus) [TaxId: 10090]
d2rd5b_ : (SER15) (GLY67) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1xsza2 : (GLU303) (ARG348) [view usage] : d.129.9.1 |TBP-like |RalF, C-terminal domain |RalF, C-terminal domain |RalF, C-terminal domain |Legionella pneumophila [TaxId: 446]
d1kkha1 : (ASN87) (ASN133) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |Mevalonate kinase |Methanococcus jannaschii [TaxId: 2190]
d2o26a_ : (SER71) (ALA132) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, d.58, i.1, c.26, c.66, c.45, c.42, e.22, d.129, c.23, c.37, c.55, d.14, d.3, c.87, c.60, c.73, c.25, c.30,
a.26, d.61, b.142, d.197