Tableau information
Concept source: d3p39d_ amino acid (a.a.) range (THR165)(ALA197)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR165) (ASP184) H1
(ASN185) (GLU191) E2
(GLU191) (ALA197) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 148.5° E2
H3 -131.1° -73.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wnha2 : (GLU101) (ASN151) [view usage] : d.17.1.5 |Cystatin-like |Cystatin/monellin |Latexin-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4gbua_ : (THR162) (ASP203) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d4h0pb2 : (SER315) (GLY366) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cryptococcus neoformans [TaxId: 5207]
d4g7ra_ : (LEU181) (GLY256) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d3nfua2 : (SER266) (TYR291) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
d1af2a1 : (LEU20) (ALA44) [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |Two-domain cytidine deaminase |Escherichia coli [TaxId: 562]
d2oy9a1 : (SER14) (PRO53) [view usage] : a.276.1.1 |BH2638-like |BH2638-like |BH2638-like |Uncharacterized protein BH2638 |Bacillus halodurans [TaxId: 86665]
d3txza_ : (LYS163) (ASP203) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d1j5ob_ : (ARG277) (LYS311) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1zc6a2 : (ASP225) (LEU264) [view usage] : c.55.1.5 |Ribonuclease H-like motif |Actin-like ATPase domain |BadF/BadG/BcrA/BcrD-like |Probable N-acetylglucosamine kinase CV2896 |Chromobacterium violaceum [TaxId: 536]
d1opja_ : (ALA426) (TYR454) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
d3f1lb_ : (ALA164) (ALA205) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3eb2a_ : (ASP115) (ASP145) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d2bo9b2 : (GLU101) (ASN151) [view usage] : d.17.1.5 |Cystatin-like |Cystatin/monellin |Latexin-like |Latexin |Human (Homo sapiens) [TaxId: 9606]
d1m9na1 : (SER35) (GLY57) [view usage] : c.24.1.3 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Inosicase |IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC |Chicken (Gallus gallus) [TaxId: 9031]
d1qh3a_ : (ASN190) (TYR221) [view usage] : d.157.1.2 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Glyoxalase II (hydroxyacylglutathione hydrolase) |Glyoxalase II (hydroxyacylglutathione hydrolase) |Human (Homo sapiens) [TaxId: 9606]
d1vjra_ : (ALA51) (ARG84) [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |Hypothetical protein TM1742 |Thermotoga maritima [TaxId: 2336]
d3ojca2 : (CYS198) (LEU230) [view usage] : c.78.2.0 |ATC-like |Aspartate/glutamate racemase |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d3rnda_ : (THR162) (ASP203) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d4k7ya_ : (THR162) (ASP203) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d3mznb2 : (SER266) (THR289) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
d2bkaa1 : (VAL203) (LEU233) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |TAT-interacting protein TIP30 |Human (Homo sapiens) [TaxId: 9606]
d4ab4a_ : (GLU144) (GLN185) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d3d6ra_ : (SER170) (ARG200) [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 381517]
d1knwa2 : (THR241) (GLY278) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Diaminopimelate decarboxylase LysA |Escherichia coli [TaxId: 562]
d3mzna2 : (SER266) (THR289) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
d4gwea_ : (LYS163) (ASP203) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d3p31b_ : (GLY166) (PHE196) [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 680789]
d2b51a1 : (GLU54) (GLY90) [view usage] : d.218.1.10 |Nucleotidyltransferase |Nucleotidyltransferase |RNA editing terminal uridyl transferase 2, RET2, catalytic domain |RNA editing terminal uridyl transferase 2, TUTase 2, RET2 |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1vs7p1 : (ARG56) (VAL78) [view usage] : d.27.1.1 |Ribosomal protein S16 |Ribosomal protein S16 |Ribosomal protein S16 |Ribosomal protein S16 |Escherichia coli [TaxId: 562]
d1moma_ : (PHE164) (SER191) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Momorcharin (momordin) |Bitter gourd (Momordica charantia) [TaxId: 3673]
d1vysx_ : (PRO157) (SER193) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
d2gela2 : (PRO146) (TRP170) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d1b25a2 : (THR140) (LEU168) [view usage] : d.152.1.1 |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Formaldehyde ferredoxin oxidoreductase |Pyrococcus furiosus [TaxId: 2261]
d1wzza1 : (TRP197) (HIS257) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Probable endoglucanase CmcAX |Acetobacter xylinus [TaxId: 28448]
d1n6ua1 : (VAL55) (HIS76) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interferon-alpha/beta receptor beta chain |Human (Homo sapiens) [TaxId: 9606]
d4rhcc_ : (GLU55) (THR83) [view usage] : c.23.13.0 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |automated matches |automated matches |Acinetobacter baumannii [TaxId: 400667]
d1zc6b2 : (ASP225) (LEU264) [view usage] : c.55.1.5 |Ribonuclease H-like motif |Actin-like ATPase domain |BadF/BadG/BcrA/BcrD-like |Probable N-acetylglucosamine kinase CV2896 |Chromobacterium violaceum [TaxId: 536]
d3kipi_ : (THR55) (THR84) [view usage] : c.23.13.0 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |automated matches |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d2rada1 : (TYR371) (GLU400) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d1jw1a1 : (PRO144) (GLN171) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Goat (Capra hircus) [TaxId: 9925]
d4nasb1 : (THR89) (PHE122) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Alicyclobacillus acidocaldarius [TaxId: 521098]
d4h4ia_ : (THR162) (ASP203) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d1wzaa2 : (ILE264) (ALA294) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Halothermothrix orenii [TaxId: 31909]
d2fcpa_ : (PRO24) (HIS61) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d1k02a_ : (ASP164) (ASP203) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d3sdoa_ : (ASP36) (ASN71) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d3qt3a_ : (PRO81) (SER151) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d2gbsa1 : (MET110) (GLY136) [view usage] : b.122.1.8 |PUA domain-like |PUA domain-like |Atu2648/PH1033-like |Hypothetical protein RPA0253 |Rhodopseudomonas palustris [TaxId: 1076]
d2yhxa_ : (THR349) (TYR397) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Hexokinase |Baker's yeast (Saccharomyces cerevisiae), BIII [TaxId: 4932]
d3eb2b_ : (ASP115) (ASP145) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d4gxma_ : (THR162) (ASP203) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d1l9xa_ : (HIS220) (ARG256) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |gamma-glutamyl hydrolase |Human (Homo sapiens) [TaxId: 9606]
d4jdpa_ : (SER50) (LYS85) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3oeuf_ : (ALA186) (ASN218) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.94, c.2, d.58, c.108, d.157, a.102, d.165, c.23, f.4, d.144, c.55, d.153, b.122, b.1, c.78, c.97, d.17, f.24,
c.24, i.12, d.299, d.218, c.150, a.276, d.152, d.27