Tableau information
Concept source: d2izpa_ amino acid (a.a.) range (ASP1233)(THR1301)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP1233) (SER1241) H1
(GLY1246) (ASP1250) E2
(ASP1250) (THR1301) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 81.9° E2
H3 -166.4° -99.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3lbla_ : (THR49) (PHE86) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
d1n54a1 : (LYS188) (ARG243) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |CBP80, 80KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1chua1 : (ASN429) (ALA479) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |L-aspartate oxidase |Escherichia coli [TaxId: 562]
d1evka2 : (ASN333) (LEU353) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Threonyl-tRNA synthetase (ThrRS) |Escherichia coli [TaxId: 562]
d3gwlb_ : (HIS100) (LEU142) [view usage] : a.24.15.0 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |automated matches |automated matches |African swine fever virus ba71v [TaxId: 10498]
d3umgh_ : (ARG214) (GLY249) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d2oxna_ : (HIS165) (GLY198) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-hexosaminidase NagZ |Vibrio cholerae [TaxId: 666]
d3umgd_ : (ARG214) (GLY249) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d1neka1 : (PRO456) (LEU494) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydogenase |Escherichia coli [TaxId: 562]
d2izpb_ : (PRO2232) (THR2301) [view usage] : a.250.1.1 |IpaD-like |IpaD-like |IpaD-like |Putative membrane antigen BipD |Burkholderia pseudomallei [TaxId: 28450]
d3umgb_ : (ARG214) (GLY249) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d4fqfa_ : (GLU347) (LYS397) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d2j0oa1 : (THR251) (SER321) [view usage] : a.250.1.1 |IpaD-like |IpaD-like |IpaD-like |Invasin IpaD |Shigella flexneri [TaxId: 623]
d3r9va_ : (THR251) (THR318) [view usage] : a.250.1.1 |IpaD-like |IpaD-like |IpaD-like |automated matches |Shigella flexneri [TaxId: 623]
d1kf6a1 : (TRP448) (VAL489) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Fumarate reductase |Escherichia coli [TaxId: 562]
d2izpa_ : (ASP1233) (THR1301) [view usage] : a.250.1.1 |IpaD-like |IpaD-like |IpaD-like |Putative membrane antigen BipD |Burkholderia pseudomallei [TaxId: 28450]
d4hwra1 : (CYS334) (LEU353) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2m6ka_ : (PRO227) (ASN255) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1tyfa_ : (SER160) (GLY183) [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |Clp protease, ClpP subunit |Escherichia coli [TaxId: 562]
d2jc4a_ : (ASP186) (ALA228) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 487]
d2ym0a_ : (PRO260) (SER328) [view usage] : a.250.1.0 |IpaD-like |IpaD-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d3umga_ : (ARG214) (GLY249) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d4erfa_ : (THR49) (PHE86) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
d2zl3a_ : (LEU163) (GLY185) [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |Clp protease, ClpP subunit |Helicobacter pylori [TaxId: 210]
d3umge_ : (ARG214) (ALA248) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.118, c.108, c.82, c.92, c.14, d.104, d.151, a.24, a.42, a.7, a.250