Tableau information
Concept source: d1ddja_ amino acid (a.a.) range (THR691)(ARG712)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR691) (LEU697) H1
(LEU697) (GLU706) E2
(GLU706) (ARG712) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -84.4° E2
H3 -137.8° 91.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ox0a1 : (ASP214) (GLY250) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase II |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4nz2a_ : (GLU438) (LEU467) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
d1g0ca_ : (ALA224) (GLY271) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alkaline cellulase K catalytic domain |Bacillus sp. [TaxId: 1409]
d4asia1 : (ALA1764) (GLY1784) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1exzc_ : (LEU498) (PHE526) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |Stem cell factor, SCF |Human (Homo sapiens) [TaxId: 9606]
d1g8ka2 : (GLU220) (THR240) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d1sf9a_ : (SER112) (GLN125) [view usage] : b.34.15.1 |SH3-like barrel |Hypothetical protein YfhH |Hypothetical protein YfhH |Hypothetical protein YfhH |Bacillus subtilis [TaxId: 1423]
d2diea2 : (GLY443) (SER459) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Bacillus sp.
d1xmda1 : (ASN262) (GLY299) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
d1g8ja2 : (GLU220) (THR240) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d1q60a_ : (GLY62) (SER93) [view usage] : d.288.1.1 |GTF2I-like repeat |GTF2I-like repeat |GTF2I-like repeat |General transcription factor II-I |Mouse (Mus musculus) [TaxId: 10090]
d2p0ma1 : (MET258) (ILE285) [view usage] : a.119.1.2 |Lipoxigenase |Lipoxigenase |Animal lipoxigenases |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1pdkb_ : (ARG30) (VAL63) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |PapK pilus subunit |Escherichia coli [TaxId: 562]
d4asie1 : (ALA1764) (GLY1784) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oxha1 : (ASP214) (GLY250) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase II |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2jioa2 : (THR160) (PRO182) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Desulfovibrio desulfuricans [TaxId: 876]
d1ojoa3 : (GLY586) (SER605) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1p6gp_ : (LEU54) (VAL78) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d1a6ra_ : (PRO426) (ALA451) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |Bleomycin hydrolase |Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]
d2gqda1 : (ASP215) (GLY251) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase II |Staphylococcus aureus [TaxId: 1280]
d2xuaa_ : (ARG199) (ASP217) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia xenovorans [TaxId: 266265]
d2iwya1 : (ASP259) (ARG295) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3o04a1 : (ASP214) (GLY250) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d2rjta1 : (ASP214) (GLY250) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase II |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3f92a1 : (SER85) (ALA119) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain |Human (Homo sapiens) [TaxId: 9606]
d2cg2a2 : (PRO184) (VAL209) [view usage] : d.157.1.13 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Alkylsulfatase-like |Alkylsulfatase SdsA1 |Pseudomonas aeruginosa [TaxId: 287]
d4dalg_ : (TYR293) (ASP340) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2ey4a2 : (PRO42) (ILE72) [view usage] : d.265.1.2 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase II TruB |Pseudouridine synthase II TruB |Pyrococcus furiosus [TaxId: 2261]
d3fysa_ : (GLU142) (GLY171) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1gjua2 : (SER211) (LEU229) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltosyltransferase |Thermotoga maritima [TaxId: 2336]
d1h3da1 : (GLY73) (LYS125) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Escherichia coli [TaxId: 562]
d2bepa1 : (SER85) (ALA119) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain |Cow (Bos taurus) [TaxId: 9913]
d3gfoa_ : (SER73) (LEU95) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Clostridium perfringens [TaxId: 195103]
d1xmca1 : (ASN262) (GLY299) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
d3ro8a_ : (TYR11) (GLU27) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Paenibacillus sp. [TaxId: 324057]
d2edia_ : (THR92) (LEU128) [view usage] : d.20.1.0 |UBC-like |UBC-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2z67a1 : (ALA264) (LEU281) [view usage] : c.67.1.9 |PLP-dependent transferase-like |PLP-dependent transferases |SepSecS-like |Selenocysteinyl-tRNA synthase (SepSecS) |Methanococcus maripaludis [TaxId: 39152]
d1g8jc2 : (GLU220) (THR240) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d2v3va2 : (THR160) (PRO182) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Desulfovibrio desulfuricans [TaxId: 876]
d1ur6a_ : (ASN79) (LEU110) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Human (Homo sapiens), ubch5b [TaxId: 9606]
d4i1wa_ : (PHE315) (GLY364) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d1khpa_ : (PRO68) (GLY101) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |Papain |Papaya (Carica papaya) [TaxId: 3649]
d1awea_ : (LYS93) (LYS111) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Son of sevenless-1 (sos-1) |Human (Homo sapiens) [TaxId: 9606]
d2ey4b2 : (ILE43) (ASN74) [view usage] : d.265.1.2 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase II TruB |Pseudouridine synthase II TruB |Pyrococcus furiosus [TaxId: 2261]
d2iwyb1 : (ASP259) (ARG295) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4i3xa_ : (ALA304) (GLY353) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d4dala_ : (TYR293) (GLN341) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.119, c.67, c.69, c.81, c.94, a.104, i.1, c.82, b.30, b.47, d.157, c.14, c.37, c.95, d.3, b.2, d.20, c.43, b.55,
b.34, b.71, a.26, c.119, d.265, d.288