Tableau information
Concept source: d1pwwb1 amino acid (a.a.) range (THR31)(PRO67)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR31) (ILE43) H1
(ILE43) (LYS49) E2
(VAL54) (PRO67) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -58.3° E2
H3 118.1° 149.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fg3a_ : (ALA306) (GLU354) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Escherichia coli [TaxId: 562]
d3fqaa_ : (LEU1383) (LEU1433) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Synechococcus elongatus [TaxId: 269084]
d1uwkb_ : (ASP269) (THR290) [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |Urocanate hydratase HutU |Pseudomonas putida [TaxId: 303]
d4tria_ : (ARG24) (PRO59) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1b3ba2 : (GLY135) (GLY164) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
d1srna_ : (THR3) (ASN34) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Cow (Bos taurus) [TaxId: 9913]
d1uwka_ : (ASP269) (THR290) [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |Urocanate hydratase HutU |Pseudomonas putida [TaxId: 303]
d2oqtd_ : (LEU3) (LYS37) [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301447]
d2ch2a_ : (TRP329) (PRO385) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
d2e0ma_ : (SER3) (ASN34) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hoza_ : (LEU1383) (LEU1433) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Synechococcus elongatus [TaxId: 269084]
d1u08a_ : (LEU341) (ARG384) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Putative methionine aminotransferase YdbL |Escherichia coli [TaxId: 562]
d1lc8a_ : (ASP310) (THR358) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |L-threonine-O-3-phosphate decarboxylase CobD |Salmonella enterica [TaxId: 28901]
d3k92a1 : (GLY147) (ARG175) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3nbub_ : (ASP232) (GLY254) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |automated matches |Escherichia coli [TaxId: 668369]
d1b0pa2 : (LEU796) (PHE828) [view usage] : c.36.1.12 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |PFOR PP module |Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI |Desulfovibrio africanus [TaxId: 873]
d2plfa3 : (THR173) (ILE202) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Initiation factor eIF2 gamma subunit, N-terminal (G) domain |Sulfolobus solfataricus [TaxId: 2287]
d1f9nb1 : (ARG6) (GLY33) [view usage] : a.4.5.3 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Arginine repressor (ArgR), N-terminal DNA-binding domain |Arginine repressor (ArgR), N-terminal DNA-binding domain |Bacillus subtilis [TaxId: 1423]
d1gxkb_ : (TYR595) (PHE614) [view usage] : d.215.1.1 |Smc hinge domain |Smc hinge domain |Smc hinge domain |Smc hinge domain |Thermotoga maritima [TaxId: 2336]
d1zvda_ : (VAL634) (PHE663) [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ksha_ : (PRO80) (PHE105) [view usage] : d.106.1.1 |SCP-like |SCP-like |Sterol carrier protein, SCP |automated matches |Yellow fever mosquito (Aedes aegypti) [TaxId: 7159]
d4nbsa1 : (THR173) (ILE202) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d1lc7a_ : (ASP310) (THR358) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |L-threonine-O-3-phosphate decarboxylase CobD |Salmonella enterica [TaxId: 28901]
d4em6a_ : (VAL234) (GLY252) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
d2e24a3 : (GLY430) (VAL456) [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Bacillus sp. [TaxId: 84635]
d1rmga_ : (ALA12) (CYS47) [view usage] : b.80.1.3 |Single-stranded right-handed beta-helix |Pectin lyase-like |Galacturonase |Rhamnogalacturonase A |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d3hafa_ : (ASN153) (THR190) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4qfia_ : (PRO4) (GLY34) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2dr1a_ : (ASP327) (GLY384) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d4lnma_ : (GLY283) (LEU331) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 945433]
d1diva1 : (ARG56) (GLY107) [view usage] : d.99.1.1 |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Bacillus stearothermophilus [TaxId: 1422]
d2o2db_ : (GLY290) (GLY310) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
d3sjza1 : (THR173) (ILE202) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d1vi7a1 : (ALA63) (GLY94) [view usage] : d.14.1.11 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |YigZ N-terminal domain-like |Hypothetical protein YigZ, N-terminal domain |Escherichia coli [TaxId: 562]
d4qfib_ : (PRO4) (GLY34) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3epub_ : (ASN61) (GLY130) [view usage] : d.198.1.0 |Secretion chaperone-like |Type III secretory system chaperone-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d2dr1b_ : (ASP327) (GLY384) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d3n34a_ : (TYR285) (ASN320) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Plasmodium falciparum [TaxId: 36329]
d3fkdb_ : (THR288) (GLU340) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Porphyromonas gingivalis [TaxId: 837]
d3wu4e_ : (ASN655) (GLY694) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Escherichia coli [TaxId: 562]
d1ijia_ : (ALA306) (GLU354) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Escherichia coli [TaxId: 562]
d3pena1 : (THR173) (ILE202) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d1qgda1 : (ASP338) (PHE368) [view usage] : c.36.1.6 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like Pyr module |Transketolase (TK), Pyr module |Escherichia coli [TaxId: 562]
d4be8a_ : (VAL784) (MET813) [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tvga_ : (ILE4) (ILE31) [view usage] : b.18.1.9 |Galactose-binding domain-like |Galactose-binding domain-like |APC10-like |Placental protein 25, pp25 |Human (Homo sapiens) [TaxId: 9606]
d2csua3 : (GLU324) (ASP366) [view usage] : c.23.4.1 |Flavodoxin-like |Succinyl-CoA synthetase domains |Succinyl-CoA synthetase domains |Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 |Pyrococcus horikoshii [TaxId: 53953]
d4ahda_ : (SER4) (GLY34) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d1lc5a_ : (ASP310) (LEU357) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |L-threonine-O-3-phosphate decarboxylase CobD |Salmonella enterica [TaxId: 28901]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.1, c.67, a.104, b.30, c.80, d.92, c.23, c.37, c.36, b.18, d.14, d.106, a.4, d.5, e.51, c.58, d.148, d.6, d.112,
d.198, d.215, d.99