Tableau information
Concept source: d1lwui1 amino acid (a.a.) range (GLN298)(GLY329)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN298) (THR304) H1
(GLY307) (THR312) E2
(SER323) (GLY329) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -61.3° E2
H3 -83.9° -47.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1lwuc1 : (GLN298) (GLY329) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Sea lamprey (Petromyzon marinus), gamma [TaxId: 7757]
d2hp6b_ : (ASP55) (PRO72) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d1fzbf1 : (SER300) (GLY331) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), gamma [TaxId: 9606]
d3j3bf_ : (PRO93) (ILE110) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Homo sapiens [TaxId: 9606]
d1lwui1 : (GLN298) (GLY329) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Sea lamprey (Petromyzon marinus), gamma [TaxId: 7757]
d1n73c1 : (ASP299) (GLY329) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Sea lamprey (Petromyzon marinus), gamma [TaxId: 7757]
d1m1jb1 : (GLY366) (GLY403) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Chicken (Gallus gallus), beta [TaxId: 9031]
d2hgjf1 : (PRO30) (ALA58) [view usage] : c.22.1.1 |Ribosomal protein L4 |Ribosomal protein L4 |Ribosomal protein L4 |Ribosomal protein L4 |Thermus thermophilus [TaxId: 274]
d3mxba_ : (LYS7) (LYS36) [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d2vp2a_ : (LYS44) (ASN59) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxyribonucleoside kinase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2xe0a_ : (LYS7) (LYS36) [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d2ggka1 : (ASP61) (GLY89) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium radiobacter [TaxId: 358]
d2ggla1 : (GLU62) (GLY89) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium radiobacter [TaxId: 358]
d1fo6a_ : (ASP61) (GLY89) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium radiobacter [TaxId: 358]
d1fzac1 : (SER300) (GLY331) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), gamma [TaxId: 9606]
d1w8se_ : (LEU4) (GLY30) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermoproteus tenax [TaxId: 2271]
d2yceb_ : (LEU4) (GLY30) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
d3a64a_ : (GLU44) (THR70) [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
d1wara_ : (ASP75) (LEU93) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kcxa2 : (PHE348) (GLY373) [view usage] : c.1.9.6 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Hydantoinase (dihydropyrimidinase), catalytic domain |Dihydropyrimidinase related protein-1 |Mouse (Mus musculus) [TaxId: 10090]
d3bu7a1 : (ASN205) (SER249) [view usage] : b.82.1.23 |Double-stranded beta-helix |RmlC-like cupins |Gentisate 1,2-dioxygenase-like |Gentisate 1,2-dioxygenase |Silicibacter pomeroyi [TaxId: 89184]
d3zfec_ : (LEU43) (ARG70) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Human enterovirus 71 [TaxId: 39054]
d2xaca_ : (TRP17) (THR42) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m1je1 : (GLY366) (GLY403) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Chicken (Gallus gallus), beta [TaxId: 9031]
d3a9ba_ : (GLU44) (THR70) [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
d1h8ya_ : (ASN55) (GLY81) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-13 [TaxId: 287]
d1j90a_ : (LYS44) (ASN59) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxyribonucleoside kinase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1w8sa1 : (ASN3) (GLY30) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
d3vboc_ : (LEU43) (ARG70) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1gosa2 : (SER374) (GLY395) [view usage] : d.16.1.5 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |L-aminoacid/polyamine oxidase |Monoamine oxidase B |Human (Homo sapiens) [TaxId: 9606]
d1ok6a_ : (LEU4) (GLY30) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
d2esqa1 : (TYR60) (GLY82) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Human (Homo sapiens), ubch5b [TaxId: 9606]
d3vmkb_ : (ARG122) (GLY145) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Shewanella benthica [TaxId: 43661]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, b.82, d.159, c.6, i.1, c.77, c.37, d.171, b.121, d.160, d.20, d.16, d.95, g.17, c.22