Tableau information
Concept source: d4jrhb1 amino acid (a.a.) range (THR196)(GLY251)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR196) (LYS207) H1
(VAL231) (GLU243) E2
(GLU245) (GLY251) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 107.3° E2
H3 -130.3° 76.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2j8ba_ : (PHE47) (GLU76) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |CD59 |Human (Homo sapiens) [TaxId: 9606]
d4c2sa_ : (ASP326) (ASN353) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2iqxa_ : (ASP4) (MET47) [view usage] : b.17.1.1 |PEBP-like |PEBP-like |Phosphatidylethanolamine binding protein |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2aaza_ : (VAL263) (GLY290) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Fungus (Filobasidiella neoformans) [TaxId: 5207]
d1e4cp_ : (LEU182) (PHE206) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
d2hgjf1 : (ASN182) (GLY208) [view usage] : c.22.1.1 |Ribosomal protein L4 |Ribosomal protein L4 |Ribosomal protein L4 |Ribosomal protein L4 |Thermus thermophilus [TaxId: 274]
d1uoka2 : (LYS176) (LYS206) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Oligo-1,6, glucosidase |Bacillus cereus [TaxId: 1396]
d4lw2c_ : (SER219) (MET242) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1otca1 : (VAL156) (SER201) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Telomere end binding protein alpha subunit |Oxytricha nova [TaxId: 200597]
d2z1ma_ : (ILE104) (GLY132) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Aquifex aeolicus [TaxId: 224324]
d2jf6b_ : (HIS39) (GLY60) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rauvolfia serpentina [TaxId: 4060]
d1nvjb_ : (ARG39) (ASN72) [view usage] : d.41.5.1 |alpha/beta-Hammerhead |Molybdopterin synthase subunit MoaE |Molybdopterin synthase subunit MoaE |Molybdopterin synthase subunit MoaE |Escherichia coli [TaxId: 562]
d1rp0a1 : (GLY76) (ILE102) [view usage] : c.3.1.6 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |Thi4-like |Thiazole biosynthetic enzyme Thi4 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3emva_ : (ARG117) (LYS147) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Plasmodium vivax [TaxId: 5855]
d3b7wa_ : (GLU521) (LYS569) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1irug_ : (ASP202) (LYS244) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Cow (Bos taurus) [TaxId: 9913]
d4hwtb2 : (GLY710) (ARG748) [view usage] : c.51.1.0 |Anticodon-binding domain-like |Class II aaRS ABD-related |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w3ua_ : (ALA195) (ALA215) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Phosphoserine aminotransferase, PSAT |Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
d1kgya_ : (ASP104) (ASN137) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |Ligand-binding domain of the ephb2 receptor tyrosine kinase |Mouse (Mus musculus) [TaxId: 10090]
d1b7aa_ : (ASP3) (LYS46) [view usage] : b.17.1.1 |PEBP-like |PEBP-like |Phosphatidylethanolamine binding protein |Phosphatidylethanolamine binding protein, PEBP |Cow (Bos taurus) [TaxId: 9913]
d1omoa_ : (GLY72) (TYR119) [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Archaeal alanine dehydrogenase |Archaeoglobus fulgidus [TaxId: 2234]
d1mw7a_ : (ASN124) (ASN146) [view usage] : e.39.1.1 |YebC-like |YebC-like |YebC-like |Hypothetical protein HP0162 |Helicobacter pylori [TaxId: 210]
d2qyza_ : (ASN109) (PRO126) [view usage] : b.172.1.0 |YopX-like |YopX-like |automated matches |automated matches |Clostridium tetani [TaxId: 212717]
d2fgza4 : (GLN1023) (ALA1039) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Pullulanase PulA |Klebsiella pneumoniae [TaxId: 573]
d3h77a2 : (GLU208) (GLU245) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1chua3 : (ARG290) (GLN323) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |L-aspartate oxidase |Escherichia coli [TaxId: 562]
d4ifra_ : (ASP59) (TRP88) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d2k07a_ : (PRO100) (VAL129) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |Ufm1-conjugating enzyme 1, UFC1 |Human (Homo sapiens) [TaxId: 9606]
d1u6ra2 : (HIS304) (THR326) [view usage] : d.128.1.2 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |Guanido kinase catalytic domain |Creatine kinase, C-terminal domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1e5la2 : (PRO228) (GLY262) [view usage] : d.81.1.2 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |Homoserine dehydrogenase-like |Saccharopine reductase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d1rzua_ : (GLU231) (ASN254) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
d2qhfa_ : (LEU244) (ARG272) [view usage] : d.258.1.0 |Chorismate synthase, AroC |Chorismate synthase, AroC |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1mjda_ : (SER115) (ASN149) [view usage] : d.15.11.1 |beta-Grasp (ubiquitin-like) |Doublecortin (DC) |Doublecortin (DC) |Doublecortin |Human (Homo sapiens) [TaxId: 9606]
d1ou5a2 : (THR13) (GLY43) [view usage] : d.218.1.4 |Nucleotidyltransferase |Nucleotidyltransferase |Poly A polymerase head domain-like |tRNA CCA-adding enzyme, head domain |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d1neka3 : (ARG286) (LEU327) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydogenase |Escherichia coli [TaxId: 562]
d3nv8a_ : (SER428) (ASP462) [view usage] : c.1.10.8 |TIM beta/alpha-barrel |Aldolase |Class-II DAHP synthetase |Probable DAHP synthetase AroG, phenylalanine-repressible |Mycobacterium tuberculosis [TaxId: 1773]
d4ifka_ : (ASP59) (TRP88) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d3ir5a1 : (GLN586) (ASN613) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1gzja_ : (ASP33) (VAL58) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endocellulase EngI |Thermoascus aurantiacus [TaxId: 5087]
d2iqya_ : (ASP4) (MET47) [view usage] : b.17.1.1 |PEBP-like |PEBP-like |Phosphatidylethanolamine binding protein |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2j4ra1 : (LYS71) (ALA93) [view usage] : c.55.1.8 |Ribonuclease H-like motif |Actin-like ATPase domain |Ppx/GppA phosphatase |automated matches |Aquifex aeolicus [TaxId: 63363]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.81, c.2, c.68, c.56, d.117, c.74, b.40, c.55, c.95, d.153, b.18, c.87, d.81, e.23, d.20, c.51, d.41, d.168,
c.3, d.128, d.15, d.218, b.71, b.17, g.7, c.22, d.258, e.39, b.172