Tableau information
Concept source: d3cdkc_ amino acid (a.a.) range (PRO101)(LYS133)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO101) (ALA114) H1
(PRO117) (ALA122) E2
(THR127) (LYS133) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 156.1° E2
H3 36.4° -138.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1r6za1 : (PRO603) (ARG635) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |Argonaute 2 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1pzha2 : (ALA164) (GLY216) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Toxoplasma gondii [TaxId: 5811]
d2f22a1 : (LEU36) (GLN89) [view usage] : a.213.1.2 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |DinB-like |Hypothetical protein BH3987 |Bacillus halodurans [TaxId: 86665]
d1u0oc1 : (THR594) (ARG632) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Mouse (Mus musculus) [TaxId: 10090]
d1xvpc_ : (ASN227) (ILE286) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d1pzfa2 : (ALA164) (GLY216) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Toxoplasma gondii [TaxId: 5811]
d1sq0a_ : (THR594) (ARG632) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]
d1aoxa_ : (THR223) (MET262) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha2-beta1 |Human (Homo sapiens) [TaxId: 9606]
d4h8na_ : (SER102) (HIS135) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Candida parapsilosis [TaxId: 5480]
d2radb_ : (TYR371) (GLU400) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d1aoxb_ : (PHE224) (MET262) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha2-beta1 |Human (Homo sapiens) [TaxId: 9606]
d3no1b2 : (PRO346) (TYR383) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
d2dlda1 : (GLY155) (LYS185) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |D-lactate dehydrogenase |Lactobacillus helveticus [TaxId: 1587]
d1fdia1 : (TRP656) (ALA715) [view usage] : b.52.2.2 |Double psi beta-barrel |ADC-like |Formate dehydrogenase/DMSO reductase, C-terminal domain |Formate dehydrogenase H |Escherichia coli [TaxId: 562]
d2g25a2 : (SER193) (ILE242) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Pyruvate dehydrogenase E1 component, PP module |Escherichia coli [TaxId: 562]
d4c2bc_ : (SER1358) (ARG1395) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xbpa_ : (GLU66) (SER113) [view usage] : d.58.5.1 |Ferredoxin-like |GlnB-like |Prokaryotic signal transducing protein |automated matches |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d3bbns1 : (ALA12) (HIS47) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d1vrga1 : (GLU104) (ALA155) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Thermotoga maritima [TaxId: 2336]
d1b3qb3 : (VAL361) (GLU398) [view usage] : d.122.1.3 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Histidine kinase |Histidine kinase CheA |Thermotoga maritima [TaxId: 2336]
d1f61a_ : (LEU291) (LYS331) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Isocitrate lyase |Mycobacterium tuberculosis [TaxId: 1773]
d2f22b_ : (LEU36) (LYS88) [view usage] : a.213.1.2 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |DinB-like |Hypothetical protein BH3987 |Bacillus halodurans [TaxId: 86665]
d3bkka_ : (LEU240) (PRO294) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Human (Homo sapiens) [TaxId: 9606]
d1fjgs_ : (LEU16) (HIS47) [view usage] : d.28.1.1 |Ribosomal protein S19 |Ribosomal protein S19 |Ribosomal protein S19 |Ribosomal protein S19 |Thermus thermophilus [TaxId: 274]
d2rd5c_ : (LYS78) (LYS125) [view usage] : d.58.5.0 |Ferredoxin-like |GlnB-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2rd5d_ : (LYS78) (LYS125) [view usage] : d.58.5.0 |Ferredoxin-like |GlnB-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1sova2 : (ALA164) (GLY216) [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]
d1xnva1 : (GLU115) (ALA166) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Streptomyces coelicolor [TaxId: 1902]
d1ibms_ : (ASP13) (HIS47) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Thermus thermophilus [TaxId: 274]
d1naqe_ : (THR69) (LEU111) [view usage] : d.58.5.2 |Ferredoxin-like |GlnB-like |Divalent ion tolerance proteins CutA (CutA1) |Cut A1 |Escherichia coli [TaxId: 562]
d2blsa_ : (SER128) (GLY167) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
d3zsff_ : (MET100) (THR126) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 485]
d3f7oa_ : (TYR107) (ALA148) [view usage] : c.41.1.0 |Subtilisin-like |Subtilisin-like |automated matches |automated matches |Paecilomyces lilacinus [TaxId: 33203]
d1dzia_ : (PHE224) (MET262) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha2-beta1 |Human (Homo sapiens) [TaxId: 9606]
d3sbfa2 : (PRO238) (ARG274) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Vibrionales bacterium [TaxId: 391574]
d4h83a2 : (PRO346) (TYR383) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, c.94, c.2, d.58, i.1, d.92, c.124, c.14, d.122, c.36, c.62, a.123, c.41, b.52, b.34, d.162, c.150, a.213, d.28