Tableau information
Concept source: d4nbub_ amino acid (a.a.) range (GLU47)(ARG83)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU47) (GLU55) H1
(GLY59) (ARG64) E2
(ARG70) (ARG83) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -175.7° E2
H3 -20.3° 155.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4qxqa_ : (SER280) (ARG334) [view usage] : d.387.1.1 |STING C-terminal-like |STING, TM173 CTD-like |Tyrosinase cofactor MelC1 |Tyrosinase cofactor MelC1 |Human (Homo sapiens) [TaxId: 9606]
d2gyya2 : (PRO265) (VAL297) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3mc1a_ : (SER189) (LEU215) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
d1cbya_ : (ASN76) (GLY123) [view usage] : d.103.1.1 |CytB endotoxin-like |CytB endotoxin-like |CytB endotoxin-like |Mosquitocidal delta-endotoxin CytB |Bacillus thuringiensis, strain Kyushuensis [TaxId: 1428]
d1qd1a1 : (MET101) (ALA143) [view usage] : d.58.34.1 |Ferredoxin-like |Formiminotransferase domain of formiminotransferase-cyclodeaminase. |Formiminotransferase domain of formiminotransferase-cyclodeaminase. |Formiminotransferase domain of formiminotransferase-cyclodeaminase. |Pig (Sus scrofa) [TaxId: 9823]
d1wmaa1 : (SER191) (GLU248) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Carbonyl reductase/20beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1k1ca_ : (SER46) (GLN82) [view usage] : d.94.1.1 |HPr-like |HPr-like |HPr-like |Crh, catabolite repression HPr-like protein |Bacillus subtilis [TaxId: 1423]
d1edba_ : (ASP260) (GLU310) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d2a5da_ : (GLY140) (ASN172) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF6 [TaxId: 9606]
d1l5xa_ : (THR221) (GLU274) [view usage] : c.106.1.1 |SurE-like |SurE-like |SurE-like |SurE homolog PAE2908 (SurE-alpha) |Pyrobaculum aerophilum [TaxId: 13773]
d4g8jb_ : (GLU197) (LYS253) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Vibrio cholerae [TaxId: 243277]
d1kzqa1 : (THR68) (GLY92) [view usage] : b.6.2.1 |Cupredoxin-like |Major surface antigen p30, SAG1 |Major surface antigen p30, SAG1 |Major surface antigen p30, SAG1 |Toxoplasma gondii [TaxId: 5811]
d1cpxa_ : (SER254) (VAL305) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d3irta_ : (ASN9) (VAL42) [view usage] : d.3.1.6 |Cysteine proteinases |Cysteine proteinases |Ubiquitin carboxyl-terminal hydrolase UCH-L |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zl2a_ : (GLU1198) (LEU1253) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Salmonella typhimurium [TaxId: 90371]
d1s8na_ : (ALA93) (GLY140) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Probable two-component system transcriptional regulator Rv1626 |Mycobacterium tuberculosis [TaxId: 1773]
d2a5fa_ : (GLY140) (SER171) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF6 [TaxId: 9606]
d3bsug_ : (ASN44) (ARG72) [view usage] : d.100.1.0 |MbtH/L9 domain-like |L9 N-domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hsza1 : (PRO203) (GLN224) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |Phosphoglycolate phosphatase Gph |Haemophilus somnus [TaxId: 731]
d1vjfa_ : (THR3) (MSE39) [view usage] : d.116.1.1 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |YbaK/ProRS associated domain |Hypothetical protein CC0111 |Caulobacter crescentus [TaxId: 155892]
d3fvla_ : (SER254) (ASN307) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d4nu7c_ : (GLY54) (ILE81) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]
d1beea_ : (ASP260) (GLU310) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d1ee3p_ : (SER254) (VAL305) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d2hrde_ : (GLU5198) (LEU5252) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Salmonella typhimurium [TaxId: 90371]
d4d8ya_ : (THR181) (SER230) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Bacillus subtilis [TaxId: 1423]
d1udie_ : (GLY189) (SER236) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Herpes simplex virus type 1 [TaxId: 10298]
d1vkra_ : (HIS430) (HIS471) [view usage] : c.44.2.1 |Phosphotyrosine protein phosphatases I-like |PTS system IIB component-like |PTS system, Lactose/Cellobiose specific IIB subunit |PTS system mannitol-specific EIICBA component |Escherichia coli [TaxId: 562]
d4kn5a_ : (GLU175) (GLN230) [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Weissella paramesenteroides [TaxId: 585506]
d3fjua_ : (THR254) (ASN306) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wlsa_ : (THR85) (LEU133) [view usage] : c.88.1.0 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1i3cb_ : (ASN102) (VAL142) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Response regulator for cyanobacterial phytochrome |Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]
d3n1ha_ : (SER119) (GLN150) [view usage] : d.18.1.0 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d1vhwe_ : (ALA183) (GLN238) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Vibrio cholerae [TaxId: 666]
d4d8va_ : (GLU180) (SER232) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Bacillus subtilis [TaxId: 1423]
d4daea_ : (GLU180) (SER230) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Bacillus subtilis [TaxId: 1423]
d1arla_ : (SER254) (ASN307) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d2bi4a_ : (ASP53) (SER87) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |automated matches |Escherichia coli [TaxId: 562]
d4ip0c_ : (GLU197) (LYS253) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Vibrio cholerae [TaxId: 243277]
d1bava_ : (SER254) (VAL305) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d1y1ra_ : (GLU1198) (LEU1253) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Salmonella typhimurium [TaxId: 90371]
d4qxra_ : (GLN287) (ARG334) [view usage] : d.387.1.1 |STING C-terminal-like |STING, TM173 CTD-like |Tyrosinase cofactor MelC1 |Tyrosinase cofactor MelC1 |Human (Homo sapiens) [TaxId: 9606]
d1tbda_ : (PRO11) (LEU43) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Simian virus 40, Sv40 [TaxId: 10633]
d1be0a_ : (PRO265) (THR309) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d1xd3a_ : (ASN12) (PRO46) [view usage] : d.3.1.6 |Cysteine proteinases |Cysteine proteinases |Ubiquitin carboxyl-terminal hydrolase UCH-L |Ubiquitin carboxyl-terminal hydrolase UCH-l3 |Human (Homo sapiens) [TaxId: 9606]
d3hlpa_ : (SER254) (VAL305) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d4da0a_ : (THR181) (SER230) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Bacillus subtilis [TaxId: 1423]
d3mc1b_ : (SER189) (ARG216) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
d3c5cb_ : (LYS146) (ARG185) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cbxa_ : (SER254) (ASN307) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d1dtda_ : (SER610) (HIS663) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Human (Homo sapiens) [TaxId: 9606]
d3kgqa_ : (SER254) (LEU305) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d1hdea_ : (ASP260) (THR309) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d2gf0b_ : (ASP131) (LEU167) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |di-Ras1 |Human (Homo sapiens) [TaxId: 9606]
d1vkib_ : (ALA9) (ILE44) [view usage] : d.116.1.1 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |YbaK/ProRS associated domain |Hypothetical protein Atu3699 |Agrobacterium tumefaciens, strain C58 [TaxId: 358]
d2v4md_ : (ASP642) (GLY683) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pcaa2 : (VAL254) (ASN306) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Pig (Sus scrofa) [TaxId: 9823]
d1jqga1 : (SER255) (GLU310) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]
d1vhjb_ : (ALA183) (GLN238) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Vibrio cholerae [TaxId: 666]
d1eq3a_ : (ASP74) (ALA100) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Parvulin |Human (Homo sapiens), hpar14 [TaxId: 9606]
d3sd7a_ : (SER192) (LEU216) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d1rxcb_ : (GLU198) (LEU252) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Escherichia coli [TaxId: 562]
d3o6va_ : (GLU202) (LEU257) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Vibrio cholerae [TaxId: 243277]
d1uwya2 : (MET248) (GLN293) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase M, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d2ah5a1 : (GLU186) (GLN210) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |predicted phosphatase SP0104 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.2, d.58, c.108, c.56, c.80, e.22, c.23, c.37, c.18, d.3, d.81, b.6, d.116, c.88, d.89, d.26, c.44, d.94,
c.106, d.18, d.387, d.103, d.100