Tableau information
Concept source: d1faxa_ amino acid (a.a.) range (ALA56)(GLU84)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA56) (ALA61) H1
(ARG63) (GLY69) E2
(GLY79) (GLU84) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 117.3° E2
E3 -79.9° 158.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yvyb2 : (THR1413) (GLY1439) [view usage] : c.91.1.0 |PEP carboxykinase-like |PEP carboxykinase-like |automated matches |automated matches |Anaerobiospirillum succiniciproducens [TaxId: 13335]
d1s3la_ : (GLY142) (VAL164) [view usage] : d.159.1.7 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |YfcE-like |Putative phosphodiesterase MJ0936 |Methanococcus jannaschii [TaxId: 2190]
d1r11a1 : (ARG103) (ARG132) [view usage] : c.52.2.1 |Restriction endonuclease-like |tRNA-intron endonuclease catalytic domain-like |tRNA-intron endonuclease catalytic domain-like |Dimeric tRNA splicing endonuclease, domains 2 and 4 |Archaeoglobus fulgidus [TaxId: 2234]
d1n73c1 : (GLY229) (GLY261) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Sea lamprey (Petromyzon marinus), gamma [TaxId: 7757]
d1mzgb_ : (SER43) (ALA75) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |SufE (YhnA) |Escherichia coli [TaxId: 562]
d1t2ra_ : (SER29) (ARG58) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |Argonaute 2 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1i9ba_ : (ASP160) (PHE201) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Acetylcholine binding protein (ACHBP) |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d1pmla_ : (SER27) (VAL77) [view usage] : g.14.1.1 |Kringle-like |Kringle-like |Kringle modules |Plasminogen |Human (Homo sapiens) [TaxId: 9606]
d2a8ea1 : (ASN120) (LYS145) [view usage] : d.296.1.1 |YktB/PF0168-like |YktB/PF0168-like |YktB-like |Hypothetical protein YktB |Bacillus subtilis [TaxId: 1423]
d2vdca3 : (ASP197) (GLY232) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Alpha subunit of glutamate synthase, N-terminal domain |Azospirillum brasilense [TaxId: 192]
d1nman_ : (GLY429) (TRP458) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d2oqtd_ : (SER41) (THR84) [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301447]
d2aqxa_ : (SER801) (ASP822) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ytma2 : (PRO412) (GLY439) [view usage] : c.91.1.0 |PEP carboxykinase-like |PEP carboxykinase-like |automated matches |automated matches |Anaerobiospirillum succiniciproducens [TaxId: 13335]
d1flza_ : (PHE203) (GLU229) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d2nnua_ : (LYS172) (CYS195) [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 16 [TaxId: 333760]
d2a6wb_ : (ASP24) (TRP58) [view usage] : b.29.1.13 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Lectin leg-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xafb_ : (ASN43) (THR79) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein yfiH |Shigella flexneri [TaxId: 623]
d3ourb_ : (LEU125) (GLY155) [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |automated matches |Vibrio vulnificus [TaxId: 216895]
d1r0va1 : (GLU105) (ARG132) [view usage] : c.52.2.1 |Restriction endonuclease-like |tRNA-intron endonuclease catalytic domain-like |tRNA-intron endonuclease catalytic domain-like |Dimeric tRNA splicing endonuclease, domains 2 and 4 |Archaeoglobus fulgidus [TaxId: 2234]
d2zjvb_ : (ASP160) (PHE201) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d1avka1 : (GLU312) (ARG339) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d1ciya2 : (PRO422) (HIS456) [view usage] : b.77.2.1 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]
d1dwua_ : (ARG3) (GLN47) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Methanococcus thermolithotrophicus [TaxId: 2186]
d4o1jb_ : (PRO167) (GLY196) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Sordaria macrospora [TaxId: 5147]
d2a0ua1 : (PRO298) (PRO350) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Initiation factor 2b |Leishmania major [TaxId: 5664]
d3exwa_ : (ASP128) (SER179) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus 7 [TaxId: 10519]
d1dzfa2 : (ASP182) (ILE213) [view usage] : d.78.1.1 |RPB5-like RNA polymerase subunit |RPB5-like RNA polymerase subunit |RPB5 |Eukaryotic RPB5 C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2cspa1 : (VAL83) (ALA108) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Rim binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d1sg5a1 : (ASP14) (LYS41) [view usage] : b.137.1.2 |Rof/RNase P subunit-like |Rof/RNase P subunit-like |Rof-like |Inhibitor of Rho Rof |Escherichia coli [TaxId: 562]
d4hcxa_ : (SER97) (ARG135) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1xafa_ : (PRO44) (THR79) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein yfiH |Shigella flexneri [TaxId: 623]
d3f0ya_ : (ASP128) (SER179) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |automated matches |Human adenovirus 14 [TaxId: 10521]
d2a0ub_ : (PRO298) (PRO350) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Initiation factor 2b |Leishmania major [TaxId: 5664]
d1v87a_ : (HIS66) (GLY93) [view usage] : g.44.1.1 |RING/U-box |RING/U-box |RING finger domain, C3HC4 |Deltex protein 2 RING-H2 domain |Mouse (Mus musculus) [TaxId: 10090]
d1w2fa_ : (SER324) (THR344) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
d1i2ka_ : (SER222) (ALA246) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |Aminodeoxychorismate lyase |Escherichia coli [TaxId: 562]
d1r94a_ : (SER6) (GLU43) [view usage] : b.124.1.1 |HesB-like domain |HesB-like domain |HesB-like domain |Fe-S scaffold protein IscA (YfhF) |Escherichia coli [TaxId: 562]
d2jeua_ : (GLY174) (VAL198) [view usage] : b.91.1.0 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |automated matches |automated matches |Bovine papillomavirus type 1 [TaxId: 10559]
d1a0ha1 : (ALA199) (LEU245) [view usage] : g.14.1.1 |Kringle-like |Kringle-like |Kringle modules |Meizothrombin |Cow (Bos taurus) [TaxId: 9913]
d1r6na_ : (ASN170) (CYS194) [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 11 [TaxId: 10580]
d2z5ga_ : (ASN321) (GLY346) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Geobacillus zalihae [TaxId: 213419]
d3f0yg_ : (ASP128) (SER179) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |automated matches |Human adenovirus 14 [TaxId: 10521]
d1nmbn_ : (GLY429) (ASP460) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d2d26a1 : (SER301) (PRO357) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Antitrypsin, alpha-1 |Human (Homo sapiens) [TaxId: 9606]
d4niga_ : (ALA30) (THR70) [view usage] : b.82.2.10 |Double-stranded beta-helix |Clavaminate synthase-like |AlkB-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1w2ca_ : (SER324) (THR344) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
d2a98a_ : (SER546) (ASN567) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2a6va1 : (THR187) (ASP222) [view usage] : b.29.1.13 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Lectin leg-like |Emp46p N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2wcwc_ : (SER63) (PRO96) [view usage] : c.52.1.0 |Restriction endonuclease-like |Restriction endonuclease-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2a6xa1 : (THR187) (ASP222) [view usage] : b.29.1.13 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Lectin leg-like |Emp46p N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2bkoa2 : (LEU144) (GLY164) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Hypothetical protein PH0236, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d1z0ra_ : (PRO19) (LYS47) [view usage] : b.129.1.3 |Double-split beta-barrel |AbrB/MazE/MraZ-like |AbrB N-terminal domain-like |Transcription-state regulator AbrB, the N-terminal DNA recognition domain |Bacillus subtilis [TaxId: 1423]
d2ouja_ : (PRO53) (LEU87) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Thrombospondin 1 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1vd5a_ : (PRO167) (GLN211) [view usage] : a.102.1.7 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyl Hydrolase Family 88 |Unsaturated glucuronyl hydrolase |Bacillus sp. GL1 [TaxId: 84635]
d2zzra_ : (GLU193) (GLN237) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Streptococcus agalactiae [TaxId: 1311]
d4o1ja_ : (ARG170) (GLY196) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Sordaria macrospora [TaxId: 5147]
d1wu7a2 : (ASP260) (ARG292) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Histidyl-tRNA synthetase (HisRS) |Thermoplasma acidophilum [TaxId: 2303]
d2vhea_ : (ASN58) (SER86) [view usage] : b.81.1.8 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |PglD-like |Acetyltransferase PglD |Campylobacter jejuni [TaxId: 197]
d3qe2b2 : (SER464) (GLY491) [view usage] : b.43.4.1 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |NADPH-cytochrome p450 reductase FAD-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3uj2a2 : (ALA246) (ALA268) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Anaerostipes caccae [TaxId: 411490]
d1t8tb_ : (THR337) (LEU364) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Heparan sulfate glucosamine 3-O-sulfotransferase 3 |Human (Homo sapiens) [TaxId: 9606]
d1j4oa_ : (THR15) (ASP51) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Phosphotyrosine binding domain of Rad53 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2xzm2_ : (LEU38) (ALA65) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d4im7a1 : (GLN65) (VAL91) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 199310]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, c.1, b.82, c.69, b.81, c.2, d.159, i.1, b.29, b.30, b.47, a.102, c.77, c.124, c.37, d.104, c.18, d.153, d.171, d.194,
e.17, b.1, b.96, c.53, b.129, d.143, b.84, b.21, b.77, c.52, b.26, e.1, b.34, b.91, c.91, b.43, e.24, d.224, d.112, g.44,
d.78, b.124, d.296, b.137, g.14, d.286