Tableau information
Concept source: d1dqca_ amino acid (a.a.) range (LEU2)(ASN39)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU2) (GLY7) H1
(PHE27) (HIS31) E2
(CYS33) (ASN39) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 125.5° E2
E3 -46.1° 150.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1w2ta2 : (TYR119) (ASP157) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |automated matches |Thermotoga maritima [TaxId: 243274]
d2ex6a_ : (ALA403) (GLY429) [view usage] : e.3.1.3 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |Dac-like |DD-carboxypeptidase DacB |Escherichia coli [TaxId: 562]
d2xbka_ : (ALA349) (TRP397) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces natalensis [TaxId: 68242]
d2hc1a_ : (ASN1727) (ASN1759) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4u0xa_ : (ILE178) (THR227) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d1uypa2 : (TYR119) (ASP157) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Beta-fructosidase (invertase), N-terminal domain |Thermotoga maritima [TaxId: 2336]
d3bp8c_ : (ALA16) (VAL41) [view usage] : d.95.1.1 |Homing endonuclease-like |Glucose permease domain IIB |Glucose permease domain IIB |Glucose permease domain IIB |Escherichia coli [TaxId: 562]
d1y7ba2 : (LYS5) (SER30) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |Beta-D-xylosidase N-terminal domain |Clostridium acetobutylicum [TaxId: 1488]
d1guab_ : (LYS84) (PHE130) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |c-Raf1 RBD |Human (Homo sapiens) [TaxId: 9606]
d1jd3a_ : (PRO61) (PRO95) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d1hwwa2 : (GLY533) (TYR572) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1wqjb1 : (SER10) (CYS38) [view usage] : g.3.9.1 |Knottins (small inhibitors, toxins, lectins) |Growth factor receptor domain |Growth factor receptor domain |Insulin-like growth factor-binding protein 4 |Human (Homo sapiens) [TaxId: 9606]
d1i4ua_ : (ASN18) (PHE58) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Alpha-crustacyanin |European lobster (Homarus gammarus) [TaxId: 6707]
d4bnqa_ : (SER93) (ASP141) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 46170]
d1ri9a_ : (GLU9) (GLN57) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Fyn-binding protein (T-cell adapter protein adap) |Human (Homo sapiens) [TaxId: 9606]
d1dqca_ : (LEU2) (ASN39) [view usage] : g.31.1.1 |Invertebrate chitin-binding proteins |Invertebrate chitin-binding proteins |Tachycitin |Tachycitin |Horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]
d3k5sa2 : (SER175) (ILE215) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1wcha_ : (THR2234) (ASN2264) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) |Human (Homo sapiens) [TaxId: 9606]
d3c2ua1 : (GLN4) (GLU32) [view usage] : b.67.2.0 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |automated matches |automated matches |Selenomonas ruminantium [TaxId: 971]
d2xzm3_ : (CYS118) (GLN154) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3bp3a_ : (GLU12) (VAL41) [view usage] : d.95.1.1 |Homing endonuclease-like |Glucose permease domain IIB |Glucose permease domain IIB |Glucose permease domain IIB |Escherichia coli [TaxId: 562]
d1ni4a_ : (PRO331) (SER361) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |E1-beta subunit of pyruvate dehydrogenase (PP module) |Human (Homo sapiens) [TaxId: 9606]
d2hiwa_ : (GLU370) (GLY401) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1v9pa2 : (SER363) (VAL388) [view usage] : b.40.4.6 |OB-fold |Nucleic acid-binding proteins |DNA ligase/mRNA capping enzyme postcatalytic domain |NAD+-dependent DNA ligase |Thermus filiformis [TaxId: 276]
d2ch4a1 : (LYS642) (ASN666) [view usage] : b.40.7.1 |OB-fold |CheW-like |CheW-like |Histidine kinase CheA, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d4hxza2 : (GLY220) (TRP254) [view usage] : d.14.1.0 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |automated matches |automated matches |Francisella tularensis [TaxId: 376619]
d3fysa_ : (SER175) (GLU201) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2f1aa2 : (GLY533) (TYR572) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1g81a_ : (PRO61) (PRO95) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d2l0wa_ : (THR13) (ASP46) [view usage] : d.110.3.6 |Profilin-like |PYP-like sensor domain (PAS domain) |Flavin-binding PAS domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vz2a1 : (ASP115) (ALA145) [view usage] : b.69.7.1 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Prolyl oligopeptidase, N-terminal domain |Prolyl oligopeptidase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d3iuna1 : (PRO117) (LEU146) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d1gkaa_ : (ASN18) (PHE58) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Alpha-crustacyanin |European lobster (Homarus gammarus) [TaxId: 6707]
d1g1ma_ : (MET58) (GLY89) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d2ahfa_ : (GLN3) (ASP38) [view usage] : a.102.1.7 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyl Hydrolase Family 88 |automated matches |Bacillus sp. [TaxId: 84635]
d1omeb_ : (ASN34) (ASN61) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d2ix0a3 : (PRO590) (PRO642) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Exoribonuclease 2, RNB |Escherichia coli [TaxId: 562]
d2ex2a1 : (ALA403) (GLY429) [view usage] : e.3.1.3 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |Dac-like |DD-carboxypeptidase DacB |Escherichia coli [TaxId: 562]
d1pmda2 : (TRP713) (THR747) [view usage] : d.11.1.1 |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2dsqb_ : (SER10) (CYS38) [view usage] : g.3.9.1 |Knottins (small inhibitors, toxins, lectins) |Growth factor receptor domain |Growth factor receptor domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pkha1 : (GLU200) (PRO237) [view usage] : d.190.1.2 |Chorismate lyase-like |Chorismate lyase-like |UTRA domain |Histidine utilization repressor HutC |Pseudomonas syringae pv. tomato [TaxId: 323]
d1j2ea1 : (SER93) (TYR118) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2d4aa2 : (TYR223) (LYS269) [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]
d1s2pa_ : (ASN18) (PHE58) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Alpha-crustacyanin |European lobster (Homarus gammarus) [TaxId: 6707]
d1l3lc2 : (SER95) (ASP133) [view usage] : d.110.5.1 |Profilin-like |Pheromone-binding domain of LuxR-like quorum-sensing transcription factors |Pheromone-binding domain of LuxR-like quorum-sensing transcription factors |Transcription factor TraR, N-terminal domain |Agrobacterium tumefaciens [TaxId: 358]
d1sa3a_ : (ILE222) (GLY262) [view usage] : c.52.1.23 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease MspI |Restriction endonuclease MspI |Moraxella sp. [TaxId: 479]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, e.3, a.104, b.69, i.1, b.67, b.30, a.102, c.45, d.144, b.40, c.37, c.36, b.60, d.14, b.1, d.110, c.51, c.52, b.34,
d.162, d.15, d.95, c.119, g.3, d.11, d.190, g.31