Tableau information
Concept source: d1usyg_ amino acid (a.a.) range (GLY9)(LYS37)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY9) (GLY23) H1
(GLU27) (SER31) E2
(ILE32) (LYS37) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 176.3° E2
E3 13.1° 164.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fqma1 : (SER131) (ARG171) [view usage] : d.378.1.1 |Phosphoprotein oligomerization domain-like |Phosphoprotein oligomerization domain-like |Phosphoprotein oligomerization domain-like |Phosphoprotein P (M1) |Vesicular stomatitis indiana virus [TaxId: 11277]
d1mwoa2 : (LYS323) (SER359) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pyrococcus woesei [TaxId: 2262]
d4n1ua_ : (PRO125) (ARG151) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |7,8-dihydro-8-oxoguanine triphosphatase Hmth1 |Human (Homo sapiens) [TaxId: 9606]
d1y1la_ : (THR61) (PRO86) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Arsenate reductase ArsC |Archaeoglobus fulgidus [TaxId: 2234]
d3dqvr_ : (CYS53) (HIS80) [view usage] : g.44.1.1 |RING/U-box |RING/U-box |RING finger domain, C3HC4 |RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex |Human (Homo sapiens) [TaxId: 9606]
d3lvkb_ : (ASP51) (LYS79) [view usage] : d.68.3.3 |IF3-like |SirA-like |SirA-like |automated matches |Escherichia coli [TaxId: 155864]
d3buja_ : (SER346) (PHE393) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora echinospora [TaxId: 1877]
d2id0a3 : (PRO47) (PRO75) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Exoribonuclease 2, RNB |Escherichia coli [TaxId: 562]
d2g0jc_ : (ALA46) (LEU71) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein Smu.848 |Streptococcus mutans [TaxId: 1309]
d2hyed_ : (CYS53) (HIS80) [view usage] : g.44.1.1 |RING/U-box |RING/U-box |RING finger domain, C3HC4 |RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex |Human (Homo sapiens) [TaxId: 9606]
d3cjsc1 : (THR45) (LYS70) [view usage] : d.47.1.1 |Ribosomal L11/L12e N-terminal domain |Ribosomal L11/L12e N-terminal domain |Ribosomal L11/L12e N-terminal domain |Ribosomal protein L11, N-terminal domain |Thermus thermophilus [TaxId: 274]
d3bbok1 : (ARG116) (THR143) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d2wefa_ : (THR122) (TYR154) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1dl5b2 : (PRO281) (CYS315) [view usage] : d.197.1.1 |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1ue8a_ : (ALA320) (ARG363) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp119 |Sulfolobus tokodaii [TaxId: 111955]
d4nu9b_ : (MET1) (THR44) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1dl5a2 : (PRO281) (CYS315) [view usage] : d.197.1.1 |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1r1na_ : (PRO75) (ASP108) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Neisseria gonorrhoeae [TaxId: 485]
d1jdqa_ : (ARG68) (VAL97) [view usage] : d.68.3.3 |IF3-like |SirA-like |SirA-like |Hypothetical protein TM0983 |Thermotoga maritima [TaxId: 2336]
d2g0ib_ : (ALA46) (LEU71) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein Smu.848 |Streptococcus mutans [TaxId: 1309]
d2ecla_ : (CYS29) (HIS53) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ykka_ : (HIS18) (ASP65) [view usage] : b.3.6.1 |Prealbumin-like |Aromatic compound dioxygenase |Aromatic compound dioxygenase |Protocatechuate-3,4-dioxygenase, alpha chain |Pseudomonas putida [TaxId: 303]
d2khra_ : (SER5) (VAL31) [view usage] : d.100.2.0 |MbtH/L9 domain-like |MbtH-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2fqmf_ : (SER131) (LYS170) [view usage] : d.378.1.1 |Phosphoprotein oligomerization domain-like |Phosphoprotein oligomerization domain-like |Phosphoprotein oligomerization domain-like |Phosphoprotein P (M1) |Vesicular stomatitis indiana virus [TaxId: 11277]
d2iiza_ : (GLY66) (GLU99) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Melanin biosynthesis protein TyrA |Shewanella oneidensis [TaxId: 70863]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, a.104, d.68, d.58, i.1, c.82, b.40, e.7, b.3, d.113, c.44, d.64, g.44, d.47, d.378, d.100, d.197