Tableau information
Concept source: d1iaih2 amino acid (a.a.) range (SER193)(ASP219)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER193) (GLN199) H1
(GLN199) (PRO208) E2
(SER210) (ASP219) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 68.4° E2
E3 -120.9° 160.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2znwa2 : (SER150) (TYR169) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ps1a_ : (GLY92) (GLY119) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1yvyb2 : (GLY1247) (GLU1276) [view usage] : c.91.1.0 |PEP carboxykinase-like |PEP carboxykinase-like |automated matches |automated matches |Anaerobiospirillum succiniciproducens [TaxId: 13335]
d1iaih2 : (SER193) (ASP219) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1zcma1 : (SER256) (ARG295) [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Human (Homo sapiens), mu type [TaxId: 9606]
d3vkma1 : (GLY131) (SER154) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oc8b_ : (SER17) (ALA38) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
d1ioba_ : (GLY33) (LEU62) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |Interleukin-1beta |Human (Homo sapiens) [TaxId: 9606]
d2d36a_ : (PRO83) (LYS113) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1ezua_ : (PRO6) (GLY43) [view usage] : b.16.1.1 |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Escherichia coli [TaxId: 562]
d1hqna2 : (PRO321) (GLN354) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d2je8a4 : (SER98) (ASN123) [view usage] : b.18.1.5 |Galactose-binding domain-like |Galactose-binding domain-like |beta-Galactosidase/glucuronidase, N-terminal domain |Beta-mannosidase |Bacteroides thetaiotaomicron [TaxId: 818]
d1k3ca1 : (GLY253) (GLU282) [view usage] : c.91.1.1 |PEP carboxykinase-like |PEP carboxykinase-like |PEP carboxykinase C-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Escherichia coli [TaxId: 562]
d2eaka_ : (PRO127) (GLN148) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lnza1 : (LEU55) (ASP83) [view usage] : b.117.1.1 |Obg-fold |Obg GTP-binding protein N-terminal domain |Obg GTP-binding protein N-terminal domain |Obg GTP-binding protein N-terminal domain |Bacillus subtilis [TaxId: 1423]
d1tcoa_ : (GLU57) (GLY93) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Protein phosphatase-2B (PP-2B, calcineurin A subunit) |Cow (Bos taurus) [TaxId: 9913]
d2ja1a1 : (PRO44) (LYS64) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
d1bnla_ : (LEU130) (GLU175) [view usage] : d.169.1.5 |C-type lectin-like |C-type lectin-like |Endostatin |Endostatin |Human (Homo sapiens) [TaxId: 9606]
d1e9sb_ : (PRO420) (VAL457) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d1ytma2 : (GLY247) (GLU276) [view usage] : c.91.1.0 |PEP carboxykinase-like |PEP carboxykinase-like |automated matches |automated matches |Anaerobiospirillum succiniciproducens [TaxId: 13335]
d3zvfa_ : (PHE4) (PRO38) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human enterovirus [TaxId: 42789]
d1ddta2 : (THR120) (ASN151) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Diphtheria toxin, N-terminal domain |Corynebacterium diphtheriae [TaxId: 1717]
d2aqta_ : (HIS148) (VAL184) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d2x6ca2 : (THR228) (SER261) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Magnetospirillum magnetotacticum [TaxId: 188]
d1w8xh_ : (ASP320) (GLN354) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
d1v1ba_ : (GLU60) (TYR103) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |2-keto-3-deoxygluconate kinase |Thermus thermophilus [TaxId: 274]
d2k4wa_ : (SER116) (VAL152) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |automated matches |Salmonella enterica [TaxId: 119912]
d1pkqb1 : (THR83) (GLN105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1qs1a2 : (LEU367) (SER388) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Vegetative insecticidal protein 2 (VIP2) |Bacillus cereus [TaxId: 1396]
d2y6th_ : (PRO32) (GLY69) [view usage] : b.16.1.1 |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |automated matches |Yersinia pseudotuberculosis [TaxId: 502800]
d4lcvb_ : (THR203) (PRO234) [view usage] : b.7.1.0 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1lvob_ : (ALA141) (PHE158) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Transmissible gastroenteritis virus [TaxId: 11149]
d1i2aa_ : (LYS191) (LYS212) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Methanococcus jannaschii [TaxId: 2190]
d3gzxa1 : (ASP154) (TRP176) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Comamonas testosteroni [TaxId: 285]
d2wlia2 : (GLU230) (SER261) [view usage] : b.1.18.16 |Immunoglobulin-like beta-sandwich |E set domains |Cytoplasmic domain of inward rectifier potassium channel |automated matches |Magnetospirillum magnetotacticum [TaxId: 188]
d1gpea2 : (ASN392) (ASP431) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Glucose oxidase |Penicillium amagasakiense [TaxId: 63559]
d1cf3a2 : (ASN388) (ASP427) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Glucose oxidase |Aspergillus niger [TaxId: 5061]
d2ckfa1 : (ASP128) (HIS150) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Sphingomonas sp. [TaxId: 279135]
d2gbwa1 : (ASP128) (HIS150) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Sphingobium yanoikuyae [TaxId: 13690]
d1ss4b_ : (TRP43) (SER72) [view usage] : d.32.1.6 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Hypothetical protein BC1747 |Hypothetical protein BC1747 |Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]
d1ax3a_ : (ASP116) (ILE144) [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |Glucose permease IIa domain, IIa-glc |Bacillus subtilis [TaxId: 1423]
d1wida_ : (PRO206) (ARG241) [view usage] : b.142.1.2 |DNA-binding pseudobarrel domain |DNA-binding pseudobarrel domain |B3 DNA binding domain |DNA-binding protein RAV1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1idqa_ : (TYR419) (ASP477) [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
d1lv3a_ : (LYS30) (SER54) [view usage] : g.39.1.9 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |Hypothetical zinc finger protein YacG |Hypothetical zinc finger protein YacG |Escherichia coli [TaxId: 562]
d1ikop_ : (LEU46) (CYS65) [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |Ephrin-b2 ectodomain |Mouse (Mus musculus) [TaxId: 10090]
d1gw7a_ : (ASP1320) (GLN1354) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d1fg4b_ : (GLY3) (ALA22) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
d1ulia1 : (ARG145) (TRP167) [view usage] : b.33.1.2 |ISP domain |ISP domain |Ring hydroxylating alpha subunit ISP domain |Biphenyl dioxygenase large subunit BphA1, N-terminal domain |Rhodococcus sp. RHA1 [TaxId: 101510]
d1figl1 : (ALA80) (GLY99) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
d3h49a_ : (ALA68) (ASN113) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2bwya2 : (GLY236) (ARG274) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Escherichia coli [TaxId: 562]
d2x6aa2 : (THR228) (SER261) [view usage] : b.1.18.16 |Immunoglobulin-like beta-sandwich |E set domains |Cytoplasmic domain of inward rectifier potassium channel |automated matches |Magnetospirillum magnetotacticum [TaxId: 188]
d1akla1 : (ASP380) (GLY398) [view usage] : b.80.7.1 |Single-stranded right-handed beta-helix |beta-Roll |Serralysin-like metalloprotease, C-terminal domain |Metalloprotease |Pseudomonas aeruginosa [TaxId: 287]
d1gw8a_ : (ASP1320) (GLN1354) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d2cp0a1 : (LEU10) (THR32) [view usage] : b.34.10.1 |SH3-like barrel |Cap-Gly domain |Cap-Gly domain |CLIP170-related 59kda protein CLIPR-59 (1500005P14Rik) |Human (Homo sapiens) [TaxId: 9606]
d1b63a1 : (THR218) (GLY238) [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |DNA mismatch repair protein MutL |Escherichia coli [TaxId: 562]
d1miqa_ : (GLU7) (MET30) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium vivax [TaxId: 5855]
d1ii2a1 : (GLY226) (GLU255) [view usage] : c.91.1.1 |PEP carboxykinase-like |PEP carboxykinase-like |PEP carboxykinase C-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Trypanosoma cruzi [TaxId: 5693]
d2fomb1 : (MET49) (PRO67) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NS3 protease |Dengue virus type 2 [TaxId: 11060]
d1deeb2 : (LYS696) (ASP720) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain mu constant domain 1, CH1-mu |Human (Homo sapiens) [TaxId: 9606]
d4pk9a_ : (ALA190) (LEU213) [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, d.159, b.29, b.47, b.50, c.72, i.6, c.37, c.47, d.166, b.18, d.169, d.14, b.121, d.3, d.127, b.6, d.32, b.1, b.45,
b.42, b.84, c.19, c.61, b.34, c.91, b.7, d.16, a.111, e.24, b.33, b.16, g.39, b.117, b.142