Tableau information
Concept source: d3qhsb_ amino acid (a.a.) range (LEU7)(GLY34)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU7) (ARG19) H1
(VAL22) (VAL27) E2
(GLY29) (GLY34) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -133.2° E2
E3 -51.2° 156.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2iy0a1 : (GLU425) (THR453) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 1 |Human (Homo sapiens) [TaxId: 9606]
d2iy1a_ : (THR424) (THR453) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 1 |Human (Homo sapiens) [TaxId: 9606]
d1ohca2 : (LEU202) (PHE227) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Proline directed phosphatase CDC14b2 |Human (Homo sapiens) [TaxId: 9606]
d1k5dc_ : (PHE25) (THR46) [view usage] : c.10.1.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Rna1p (RanGAP1), N-terminal domain |Rna1p (RanGAP1), N-terminal domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1eh9a1 : (LEU47) (PRO67) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Glycosyltrehalose trehalohydrolase, N-terminal domain N |Sulfolobus solfataricus, km1 [TaxId: 2287]
d2dtud2 : (LEU439) (TYR464) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2vina_ : (PHE59) (GLU84) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3t9ta_ : (GLU406) (GLU436) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Tyrosine-protein kinase Itk/Tsk |Human (Homo sapiens) [TaxId: 9606]
d1ohda2 : (LEU202) (PHE227) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Proline directed phosphatase CDC14b2 |Human (Homo sapiens) [TaxId: 9606]
d1lrwa_ : (ASP2) (MET29) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Paracoccus denitrificans [TaxId: 266]
d2atza1 : (THR46) (ASN73) [view usage] : d.264.1.3 |Prim-pol domain |Prim-pol domain |HP0184-like |Hypothetical protein HP0184 |Helicobacter pylori [TaxId: 210]
d2z0tb_ : (ASP28) (LYS50) [view usage] : b.122.1.6 |PUA domain-like |PUA domain-like |ProFAR isomerase associated domain |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1hp4a2 : (PRO125) (PRO149) [view usage] : d.92.2.1 |Zincin-like |beta-N-acetylhexosaminidase-like domain |beta-N-acetylhexosaminidase domain |beta-N-acetylhexosaminidase, N-terminal domain |Streptomyces plicatus [TaxId: 1922]
d4c92e_ : (LEU7) (GLY32) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1v33a_ : (GLY281) (TYR307) [view usage] : d.264.1.1 |Prim-pol domain |Prim-pol domain |PriA-like |DNA primase |Pyrococcus horikoshii [TaxId: 53953]
d3t2da_ : (ALA247) (PRO291) [view usage] : d.280.1.1 |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |automated matches |Thermoproteus neutrophilus [TaxId: 444157]
d4amha_ : (THR69) (LEU102) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4amhb_ : (THR69) (LYS101) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rmbd2 : (LEU439) (TYR464) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d3a6qa_ : (HIS52) (ILE85) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |FMN-binding protein |Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]
d1ohea2 : (ASN201) (PHE227) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Proline directed phosphatase CDC14b2 |Human (Homo sapiens) [TaxId: 9606]
d4f7uf_ : (PRO4007) (GLY4031) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d2qlua_ : (THR236) (ALA266) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2avwa_ : (LYS233) (ILE264) [view usage] : d.3.1.12 |Cysteine proteinases |Cysteine proteinases |IgG-specific endopeptidase IdeS (Sib38) |automated matches |Streptococcus pyogenes [TaxId: 293653]
d2a4wb_ : (PRO230) (THR253) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |automated matches |Streptomyces caespitosus [TaxId: 53502]
d1gjia1 : (SER231) (LYS259) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Chicken (Gallus gallus), C-rel [TaxId: 9031]
d2hdka_ : (MET293) (HIS321) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2nn6d2 : (SER171) (THR197) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Exosome complex exonuclease RRP46 |Human (Homo sapiens) [TaxId: 9606]
d1ijaa_ : (PHE72) (LYS96) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase A |Staphylococcus aureus [TaxId: 1280]
d1svcp1 : (SER302) (PHE331) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Human (Homo sapiens) [TaxId: 9606]
d1clqa2 : (LEU439) (TYR464) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2d0va_ : (ASP2) (SER29) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |automated matches |Hyphomicrobium denitrificans [TaxId: 53399]
d2dy4d2 : (LEU439) (TYR464) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2rdeb2 : (ASN28) (CYS56) [view usage] : b.45.2.2 |Split barrel-like |PilZ domain-like |PilZ domain-associated domain |Hypothetical protein VCA0042, N-terminal domain |Vibrio cholerae O395 [TaxId: 345073]
d1xx0a1 : (LYS238) (LYS265) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Pleckstrin |Human (Homo sapiens) [TaxId: 9606]
d2avwd_ : (LYS233) (ILE264) [view usage] : d.3.1.12 |Cysteine proteinases |Cysteine proteinases |IgG-specific endopeptidase IdeS (Sib38) |automated matches |Streptococcus pyogenes [TaxId: 293653]
d1u25c_ : (SER149) (ARG187) [view usage] : c.45.1.4 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA |Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA |Selenomonas ruminantium [TaxId: 971]
d1t2oc_ : (PHE130) (LYS154) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase A |Staphylococcus aureus [TaxId: 1280]
d1jfna_ : (THR60) (LEU99) [view usage] : g.14.1.1 |Kringle-like |Kringle-like |Kringle modules |Apolipoprotein A |Human (Homo sapiens), IV-6 variant [TaxId: 9606]
d2avwb_ : (LYS233) (ILE264) [view usage] : d.3.1.12 |Cysteine proteinases |Cysteine proteinases |IgG-specific endopeptidase IdeS (Sib38) |automated matches |Streptococcus pyogenes [TaxId: 293653]
d1y6mr1 : (LEU62) (THR93) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-10 receptor 1, IL-10R1 |Human (Homo sapiens) [TaxId: 9606]
d2jnga1 : (ASN12) (GLU44) [view usage] : b.34.9.4 |SH3-like barrel |Tudor/PWWP/MBT |CPH domain |Cullin-7 |Human (Homo sapiens) [TaxId: 9606]
d1oana2 : (GLN256) (ASP290) [view usage] : f.10.1.1 |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |Envelope glycoprotein |Dengue virus type 2 [TaxId: 11060]
d2z0ta_ : (ASP28) (LYS50) [view usage] : b.122.1.6 |PUA domain-like |PUA domain-like |ProFAR isomerase associated domain |automated matches |Pyrococcus horikoshii [TaxId: 53953]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, e.8, c.10, b.47, d.92, c.45, d.144, d.3, e.17, d.32, b.122, b.1, b.45, b.55, b.34, b.38, b.36, d.264, d.101, b.100,
d.280, f.10, g.14