Tableau information
Concept source: d2c2la2 amino acid (a.a.) range (PRO229)(ASP254)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO229) (GLY234) H1
(ARG242) (PRO248) E2
(GLY250) (ASP254) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 79.8° E2
E3 -75.2° 152.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2qdna1 : (ASP99) (ASP126) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Glucocorticoid-induced TNF-related ligand, TNFSF18 |Mouse (Mus musculus) [TaxId: 10090]
d4ixfx_ : (HIS174) (ASP205) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Fungus (Pneumocystis carinii) [TaxId: 4754]
d4nfxh_ : (LEU44) (GLU89) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Escherichia coli [TaxId: 405955]
d4mpoa_ : (GLY51) (GLU100) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d3ddvb_ : (SER97) (ALA135) [view usage] : d.190.1.2 |Chorismate lyase-like |Chorismate lyase-like |UTRA domain |Transcriptional regulator EF1328 |Enterococcus faecalis [TaxId: 1351]
d1klka_ : (HIS174) (ASP205) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Fungus (Pneumocystis carinii) [TaxId: 4754]
d1ly8a_ : (PHE211) (ILE242) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
d1c86a_ : (LEU37) (ASN68) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
d1ly9a_ : (PHE211) (MET242) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
d2co3b_ : (SER90) (ASN112) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |automated matches |Salmonella typhimurium [TaxId: 99287]
d1g5aa1 : (THR589) (ASN612) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Amylosucrase |Neisseria polysaccharea [TaxId: 489]
d3lrqd_ : (ASP2) (CYS36) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h03a_ : (LEU1724) (ASN1759) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qdlb_ : (ASP65) (ASP98) [view usage] : b.40.7.0 |OB-fold |CheW-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
d4mpoe_ : (GLY51) (GLU100) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d3ddvd_ : (SER97) (ALA135) [view usage] : d.190.1.2 |Chorismate lyase-like |Chorismate lyase-like |UTRA domain |Transcriptional regulator EF1328 |Enterococcus faecalis [TaxId: 1351]
d2f42a2 : (PRO209) (ASP234) [view usage] : g.44.1.2 |RING/U-box |RING/U-box |U-box |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d2qdla_ : (ASP65) (VAL97) [view usage] : b.40.7.0 |OB-fold |CheW-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
d1l8ka_ : (PHE39) (ASN70) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), T-cell [TaxId: 9606]
d2c2la2 : (PRO229) (ASP254) [view usage] : g.44.1.2 |RING/U-box |RING/U-box |U-box |STIP1 homology and U box-containing protein 1, STUB1 |Mouse (Mus musculus) [TaxId: 10090]
d3lrqb_ : (MSE1) (CYS36) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4qnwa_ : (ASP121) (THR144) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 330879]
d3lrqa_ : (HIS0) (CYS36) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4mpob_ : (GLY51) (GLU100) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d1x51a1 : (SER61) (LEU109) [view usage] : d.113.1.3 |Nudix |Nudix |MutY C-terminal domain-like |A/G-specific adenine DNA glycosylase |Human (Homo sapiens) [TaxId: 9606]
d2b0va1 : (SER45) (GLY89) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Hypothetical protein NE0184 |Nitrosomonas europaea [TaxId: 915]
d3lrqc_ : (GLN4) (CYS36) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pkhb_ : (GLU200) (PRO237) [view usage] : d.190.1.2 |Chorismate lyase-like |Chorismate lyase-like |UTRA domain |Histidine utilization repressor HutC |Pseudomonas syringae pv. tomato [TaxId: 323]
d2oxqc_ : (PRO209) (ASP234) [view usage] : g.44.1.2 |RING/U-box |RING/U-box |U-box |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d2ho9a_ : (LEU71) (VAL101) [view usage] : b.40.7.0 |OB-fold |CheW-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.45, a.93, b.40, b.2, c.71, b.22, d.113, b.71, g.44, d.190