Tableau information
Concept source: d2b7ca3 amino acid (a.a.) range (GLY196)(LYS224)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY196) (GLU201) H1
(GLY211) (GLU215) E2
(GLY219) (LYS224) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -65.1° E2
E3 124.3° 160.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4u2md1 : (SER7) (ALA37) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |B-cell lymphoma 6 (Bcl6) protein BTB domain |Human (Homo sapiens) [TaxId: 9606]
d1weva_ : (PHE11) (HIS44) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |PHD finger protein 22 |Mouse (Mus musculus) [TaxId: 10090]
d3m52a_ : (PHE3) (LYS36) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lopa_ : (GLY34) (GLY53) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidyl-prolyl cis-trans isomerase A, PpiA |Escherichia coli [TaxId: 562]
d2q81a_ : (PRO4) (ALA37) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1buoa_ : (HIS16) (HIS46) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain |Human (Homo sapiens) [TaxId: 9606]
d1usca_ : (PHE77) (GLU112) [view usage] : b.45.1.2 |Split barrel-like |FMN-binding split barrel |NADH:FMN oxidoreductase-like |Putative styrene monooxygenase small component |Thermus thermophilus [TaxId: 274]
d1e10a_ : (SER89) (VAL114) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Halobacterium halobium [TaxId: 2242]
d2e9fd_ : (ASP236) (ASP290) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1ac5a_ : (GLY460) (THR483) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |Serine carboxypeptidase II |Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
d3b84a_ : (SER4) (ALA39) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jjga_ : (LEU75) (PHE102) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Viral structural mimic of eIF2alpha |Myxoma virus, m156r [TaxId: 10273]
d2od0a1 : (ASP50) (LYS77) [view usage] : d.198.5.2 |Secretion chaperone-like |YgaC/TfoX-N like |TfoX N-terminal domain-like |Hypothetical protein VP1028 |Vibrio parahaemolyticus [TaxId: 670]
d2z02a_ : (LEU5) (GLU24) [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d3t1ua_ : (GLY34) (GLY53) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Azotobacter vinelandii [TaxId: 322710]
d1j2aa_ : (GLY39) (GLY58) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidyl-prolyl cis-trans isomerase A, PpiA |Escherichia coli [TaxId: 562]
d2j01i1 : (THR93) (VAL144) [view usage] : d.99.1.1 |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Thermus thermophilus [TaxId: 274]
d3pbra1 : (GLY177) (LEU221) [view usage] : d.175.1.0 |Penicillin binding protein dimerisation domain |Penicillin binding protein dimerisation domain |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d5crxb2 : (ASP233) (ALA252) [view usage] : d.163.1.1 |DNA breaking-rejoining enzymes |DNA breaking-rejoining enzymes |Lambda integrase-like, catalytic core |Cre recombinase |Bacteriophage P1 [TaxId: 10678]
d1bvp12 : (GLY127) (LEU163) [view usage] : b.19.1.1 |Viral protein domain |Viral protein domain |Top domain of virus capsid protein |BTV vp7, central (top) domain |Bluetongue virus [TaxId: 40051]
d4foaa_ : (THR2) (SER28) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2nula_ : (GLY34) (GLY53) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidyl-prolyl cis-trans isomerase A, PpiA |Escherichia coli [TaxId: 562]
d4azra_ : (ILE30) (LYS61) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4azmb_ : (GLY29) (THR62) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u8va2 : (THR4) (ASN28) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |4-hydroxybutyryl-CoA dehydratase AbfD, NM domains |Clostridium aminobutyricum [TaxId: 33953]
d3zdsg_ : (LEU24) (TYR65) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d4ml2a_ : (ASN27) (HIS63) [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1jmug_ : (HIS9) (GLY46) [view usage] : d.196.1.1 |Outer capsid protein sigma 3 |Outer capsid protein sigma 3 |Outer capsid protein sigma 3 |Outer capsid protein sigma 3 |Reovirus [TaxId: 10891]
d2od0b_ : (ASP50) (LYS77) [view usage] : d.198.5.2 |Secretion chaperone-like |YgaC/TfoX-N like |TfoX N-terminal domain-like |Hypothetical protein VP1028 |Vibrio parahaemolyticus [TaxId: 670]
d1eq3a_ : (GLY105) (VAL127) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Parvulin |Human (Homo sapiens), hpar14 [TaxId: 9606]
d1f8gb1 : (ALA144) (GLY179) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Nicotinamide nucleotide transhydrogenase dI component |Rhodospirillum rubrum [TaxId: 1085]
d4u2nb1 : (GLN5) (ALA37) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1afwb1 : (SER200) (SER241) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Thiolase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4r3fa_ : (GLY47) (ASP67) [view usage] : b.62.1.0 |Cyclophilin-like |Cyclophilin-like |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d1qhva_ : (ASP396) (LYS427) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus type 2 [TaxId: 10515]
d1pzda1 : (ASP716) (ILE760) [view usage] : b.1.10.3 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |Coatomer appendage domain |Coatomer gamma subunit C-terminal domain, first subdomain |Cow (Bos taurus) [TaxId: 9913]
d4lrya_ : (SER230) (LEU272) [view usage] : c.119.1.2 |DAK1/DegV-like |DAK1/DegV-like |DAK1 |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1em2a_ : (ALA233) (GLU275) [view usage] : d.129.3.2 |TBP-like |Bet v1-like |STAR domain |Lipid transport domain of Mln64 |Human (Homo sapiens) [TaxId: 9606]
d2czra1 : (THR85) (GLY124) [view usage] : c.52.4.1 |Restriction endonuclease-like |TBP-interacting protein-like |TBP-interacting protein-like |TBP-interacting protein |Thermococcus kodakaraensis [TaxId: 311400]
d1flga_ : (ASN281) (THR310) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Ethanol dehydrogenase |Pseudomonas aeruginosa [TaxId: 287]
d2p9nb_ : (ASN226) (GLY256) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, b.82, b.19, c.69, c.2, d.117, a.127, d.129, b.40, c.37, c.55, e.6, c.95, b.60, b.1, b.45, d.143, b.62, b.21, c.52,
d.15, d.42, d.175, d.26, c.119, d.298, d.198, d.163, g.50, d.196, d.99