Tableau information
Concept source: d2zcja_ amino acid (a.a.) range (GLY22)(GLU40)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY22) (GLY32) H1
(GLY32) (VAL36) E2
(VAL36) (GLU40) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -131.7° E2
E3 -161.3° -66.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2bgia2 : (VAL241) (LYS265) [view usage] : c.25.1.0 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |automated matches |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d1mx3a1 : (LEU275) (PRO314) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Transcription corepressor CtbP |Human (Homo sapiens), Ctbp1 [TaxId: 9606]
d4m9da_ : (ASP75) (SER99) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d3bsda_ : (ALA344) (GLN366) [view usage] : b.75.1.1 |Bacteriochlorophyll A protein |Bacteriochlorophyll A protein |Bacteriochlorophyll A protein |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d2rmpa_ : (GLY116) (ALA135) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Rhizomucor miehei [TaxId: 4839]
d4jbmb2 : (ILE100) (GLN119) [view usage] : b.40.16.0 |OB-fold |HIN-2000 domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4m9db_ : (ASP75) (SER99) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d2a7la1 : (GLN5) (SER33) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin-protein ligase W (E2 W) |Human (Homo sapiens) [TaxId: 9606]
d2lira_ : (ALA3) (GLY34) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3njeb_ : (GLN37) (GLU79) [view usage] : d.24.1.0 |Pili subunits |Pili subunits |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2jg1d_ : (GLY61) (LYS84) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d3q1ya_ : (LEU65) (GLY86) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Listeria innocua [TaxId: 1642]
d1nedb_ : (SER150) (TYR180) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |HslV (ClpQ) protease |Escherichia coli [TaxId: 562]
d2qdxa2 : (THR228) (ARG253) [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |Ferredoxin reductase (flavodoxin reductase) |Pseudomonas aeruginosa [TaxId: 287]
d2ajra_ : (THR172) (ARG194) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Putative sugar kinase TM0828 |Thermotoga maritima [TaxId: 2336]
d1mr7a_ : (ILE20) (ASN42) [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |Xenobiotic acetyltransferase |Enterococcus faecium, VAT(D) [TaxId: 1352]
d1g13a_ : (GLU96) (LEU126) [view usage] : b.95.1.1 |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Human (Homo sapiens) [TaxId: 9606]
d1ozja_ : (CYS109) (GLU131) [view usage] : d.164.1.1 |SMAD MH1 domain |SMAD MH1 domain |SMAD MH1 domain |SMAD MH1 domain |Human (Homo sapiens) [TaxId: 9606]
d1neda_ : (SER150) (ALA182) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |HslV (ClpQ) protease |Escherichia coli [TaxId: 562]
d1blle2 : (MET274) (PRO307) [view usage] : c.56.5.3 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Leucine aminopeptidase, C-terminal domain |Leucine aminopeptidase, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d1nyee_ : (PRO868) (ASP907) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d3ziza_ : (ARG283) (TYR329) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Podospora anserina [TaxId: 5145]
d2opxa_ : (ALA331) (GLY360) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]
d3q31a_ : (PRO177) (PHE195) [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Fungus (Aspergillus oryzae) [TaxId: 5062]
d1pu5a_ : (GLU98) (ASP127) [view usage] : b.95.1.1 |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Human (Homo sapiens) [TaxId: 9606]
d2ag9a_ : (GLU98) (ASP127) [view usage] : b.95.1.1 |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Ganglioside M2 (gm2) activator |Human (Homo sapiens) [TaxId: 9606]
d1gnla_ : (GLN488) (GLY508) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d2b7na1 : (GLY45) (LYS67) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
d1bryy_ : (ASN191) (ILE216) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Bryodin |Red briony (Bryonia dioica) [TaxId: 3652]
d4k4ia3 : (ARG446) (GLU466) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d3v9ha_ : (ALA394) (SER424) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2p9ca1 : (ILE246) (PRO291) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Phosphoglycerate dehydrogenase |Escherichia coli [TaxId: 562]
d3v9gc_ : (ALA394) (SER424) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3u4jb_ : (SER346) (ALA378) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d1hkua1 : (ASP260) (PRO303) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Transcription corepressor CtbP |Norway rat (Rattus norvegicus), Ctbp3 [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.81, c.2, c.82, b.74, c.56, c.66, d.165, b.50, c.72, b.40, c.37, d.153, d.20, c.25, b.95, d.41, e.26, a.3, d.218,
d.227, d.24, b.75, d.164