Tableau information
Concept source: d2g9fa1 amino acid (a.a.) range (GLY513)(GLU529)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY513) (VAL518) H1
(TRP519) (SER523) E2
(PHE525) (GLU529) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -124.5° E2
E3 148.8° 59.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fo4a6 : (GLU263) (PRO281) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Xanthine oxidase, domain 3 (?) |Cow (Bos taurus) [TaxId: 9913]
d2ex6a_ : (ASP250) (GLN279) [view usage] : e.3.1.3 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |Dac-like |DD-carboxypeptidase DacB |Escherichia coli [TaxId: 562]
d1vl5a_ : (LYS174) (ILE200) [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical protein BH2331 |Bacillus halodurans [TaxId: 86665]
d1iola_ : (ASN232) (THR256) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d2wc1a_ : (ALA110) (ASP153) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d3eefa_ : (GLU36) (LYS90) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Thermoplasma acidophilum [TaxId: 2303]
d2be3a1 : (PHE82) (TYR107) [view usage] : d.218.1.8 |Nucleotidyltransferase |Nucleotidyltransferase |RelA/SpoT domain |Putative GTP pyrophosphokinase SP1097 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2snie_ : (GLY166) (PRO201) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
d1mioa_ : (SER346) (PHE369) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Clostridium pasteurianum [TaxId: 1501]
d2j4ga3 : (ARG98) (SER126) [view usage] : d.92.2.3 |Zincin-like |beta-N-acetylhexosaminidase-like domain |Hyaluronidase N-terminal domain-like |Glucosaminidase GH84, N-terminal domain |Bacteroides thetaiotaomicron [TaxId: 818]
d3nahb_ : (ASP357) (THR387) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Murine norovirus 1 [TaxId: 223997]
d1sh0a_ : (ASP354) (GLU383) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Norwalk virus [TaxId: 11983]
d2onfa1 : (PRO42) (GLY81) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein Ta0195 |Thermoplasma acidophilum [TaxId: 2303]
d1o9ga_ : (ALA17) (PRO32) [view usage] : c.66.1.29 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA methyltransferase AviRa |rRNA methyltransferase AviRa |Streptomyces viridochromogenes [TaxId: 1938]
d3v9ga_ : (ALA394) (ASP423) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4f5wa_ : (ALA156) (LEU204) [view usage] : d.387.1.1 |STING C-terminal-like |STING, TM173 CTD-like |Tyrosinase cofactor MelC1 |Tyrosinase cofactor MelC1 |Human (Homo sapiens) [TaxId: 9606]
d1w91a2 : (LYS33) (HIS54) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-D-xylosidase, catalytic domain |Bacillus stearothermophilus [TaxId: 1422]
d4nn3a_ : (GLY126) (GLY150) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio salexigens [TaxId: 526222]
d2ipla_ : (HIS152) (MET182) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
d1e5la2 : (LEU125) (GLY157) [view usage] : d.81.1.2 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |Homoserine dehydrogenase-like |Saccharopine reductase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d2i54a_ : (ASN92) (ASN123) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |automated matches |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1yb3a1 : (LEU3) (ASN41) [view usage] : d.296.1.2 |YktB/PF0168-like |YktB/PF0168-like |PF0168-like |Hypothetical protein PF0168 |Pyrococcus furiosus [TaxId: 2261]
d1bhsa_ : (PRO233) (THR256) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1nofa2 : (TYR136) (GLN163) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Glycosyl hydrolase family 5 xylanase, catalytic domain |Erwinia chrysanthemi [TaxId: 556]
d2bfga2 : (LYS33) (HIS54) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-D-xylosidase, catalytic domain |Bacillus stearothermophilus [TaxId: 1422]
d2fvya_ : (HIS152) (MET182) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
d1o9ha_ : (ALA17) (PRO32) [view usage] : c.66.1.29 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA methyltransferase AviRa |rRNA methyltransferase AviRa |Streptomyces viridochromogenes [TaxId: 1938]
d3naha_ : (ASP357) (GLN386) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Murine norovirus 1 [TaxId: 223997]
d1iqpa2 : (GLU31) (GLY53) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Replication factor C |Pyrococcus furiosus [TaxId: 2261]
d4qkub2 : (THR340) (SER363) [view usage] : d.177.1.0 |FAH |FAH |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1vs5k1 : (GLY91) (HIS117) [view usage] : c.55.4.1 |Ribonuclease H-like motif |Translational machinery components |Ribosomal protein L18 and S11 |Ribosomal protein S11 |Escherichia coli [TaxId: 562]
d3f9ra_ : (ASN92) (ASN123) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, e.3, c.1, c.94, c.2, c.108, c.82, c.92, c.66, d.92, c.93, c.23, c.37, c.55, b.18, d.81, c.41, d.177, c.33, d.145,
d.218, d.227, d.387, d.296