Protein Concepts Dictionary

Tableau information

Concept source:  d3hcka_  amino acid (a.a.) range (SER12)(ARG47)

nSSEs in this Concept: 3

String of secondary struct.elems. (SSEs) defining this concept: HEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER12)   (ALA22) H1
	   (GLY28)   (ASP34) E2
	   (SER41)   (ARG47) E3

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                   
E2      156.0°   E2            
E3      -25.7°  162.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1zb6a1 :   (ASP245)  (TYR288)   [view usage] : d.313.1.1 |Antiparallel beta/alpha barrel (PT-barrel) |Prenyltransferase-like |Prenyltransferase-like |Aromatic prenyltransferase |Streptomyces sp. CL190 [TaxId: 93372]
 d1kiaa_ :   (LEU247)  (GLY292)   [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4e5ga_ :   (HIS128)  (THR157)   [view usage] : c.52.1.34 |Restriction endonuclease-like |Restriction endonuclease-like |PA N-terminal domain |PA N-terminal domain |Influenza A virus [TaxId: 93838]
 d2e6cc_ :   (ARG142)  (TRP174)   [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2d7vb_ :    (PRO65)  (GLY126)   [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein VCA0330 |Vibrio cholerae [TaxId: 666]
 d3wd7a2 :   (CYS341)  (PRO388)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Citrus microcarpa [TaxId: 164113]
 d3do6a_ :     (ILE4)   (HIS30)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
 d3l2aa_ :   (SER288)  (ILE329)   [view usage] : d.388.1.1 |Filoviridae VP35-like |Filoviridae VP35-like |Filoviridae VP35 |Filoviridae VP35 |Reston ebolavirus [TaxId: 386032]
 d3v3xa_ :    (ASP22)   (GLU56)   [view usage] : d.15.7.1 |beta-Grasp (ubiquitin-like) |Immunoglobulin-binding domains |Immunoglobulin-binding domains |Immunoglobulin-binding protein G, different constituent domains |Streptococcus sp. [TaxId: 1320]
 d1zcwa_ :   (ASP245)  (TYR288)   [view usage] : d.313.1.1 |Antiparallel beta/alpha barrel (PT-barrel) |Prenyltransferase-like |Prenyltransferase-like |Aromatic prenyltransferase |Streptomyces sp. CL190 [TaxId: 93372]
 d3bfda_ :    (ASP25)   (TYR60)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Citrobacter sedlakii [TaxId: 67826]
 d4mtdd_ :    (CYS88)  (CYS113)   [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d3bfea_ :    (GLN28)   (TYR60)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Citrobacter sedlakii [TaxId: 67826]
 d3qesa2 :   (ARG581)  (SER628)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
 d1xj5a_ :   (HIS241)  (THR282)   [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3unb4_ :   (THR148)  (GLY191)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1yova_ :   (HIS491)  (THR531)   [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
 d1q15a2 :    (GLY93)  (SER121)   [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |beta-Lactam synthetase |Pectobacterium carotovorum [TaxId: 554]
 d1fpxa2 :   (GLU321)  (PRO352)   [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Isoflavone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d1y3ja_ :    (GLN53)   (ARG77)   [view usage] : d.58.17.0 |Ferredoxin-like |HMA, heavy metal-associated domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3d2lc_ :   (PRO202)  (ALA239)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Exiguobacterium sibiricum [TaxId: 262543]
 d4d2ob_ :    (LEU28)   (ASN61)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Citrobacter freundii [TaxId: 546]
 d1wz8a1 :     (LEU2)   (GLY28)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Probable enoyl-CoA hydratase TTHA0218 |Thermus thermophilus [TaxId: 274]
 d2jvfa1 :    (ASP55)   (GLU89)   [view usage] : k.41.1.1 |New fold designs |New fold designs |alpha+beta folds |Top7 |unidentified [TaxId: 32644]
 d1u0ua2 :   (CYS344)  (PRO391)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Dihydropinosylvin synthase |Scots pine (Pinus sylvestris) [TaxId: 3349]
 d3taga2 :   (ASP579)  (SER628)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
 d1h0xa_ :    (ILE55)   (ILE94)   [view usage] : d.68.6.1 |IF3-like |AlbA-like |DNA-binding protein AlbA |DNA-binding protein AlbA |Sulfolobus solfataricus, Sso10b1 [TaxId: 2287]
 d3ldsa2 :   (ASP579)  (SER628)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
 d1u0va2 :   (CYS341)  (ALA388)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d3suqa2 :   (ASP579)  (SER628)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
 d1qr0a1 :    (LYS38)  (SER101)   [view usage] : d.150.1.1 |4'-phosphopantetheinyl transferase |4'-phosphopantetheinyl transferase |4'-Phosphopantetheinyl transferase SFP |4'-Phosphopantetheinyl transferase SFP |Bacillus subtilis [TaxId: 1423]
 d2ruda_ :    (GLN85)  (ARG115)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Mitotic rotamase PIN1, domain 2 |Human (Homo sapiens) [TaxId: 9606]
 d1e25a_ :    (PRO27)   (ASN61)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Pseudomonas aeruginosa, PER-1 [TaxId: 287]
 d3m84a1 :   (PRO116)  (ASP165)   [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain |Francisella tularensis [TaxId: 177416]
 d3dgeb2 :   (ASP366)  (ASN412)   [view usage] : d.122.1.3 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Histidine kinase |automated matches |Thermotoga maritima [TaxId: 2336]
 d2xvma_ :   (GLY154)  (LYS197)   [view usage] : c.66.1.44 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TehB-like |automated matches |Escherichia coli [TaxId: 562]
 d2ab5a2 :   (ASN437)  (SER468)   [view usage] : d.95.2.0 |Homing endonuclease-like |Homing endonucleases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2dj6b_ :    (THR76)  (TRP115)   [view usage] : d.96.1.0 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
 d1yntf2 :  (PHE2195) (LYS2222)   [view usage] : b.6.2.1 |Cupredoxin-like |Major surface antigen p30, SAG1 |Major surface antigen p30, SAG1 |automated matches |Toxoplasma gondii [TaxId: 5811]
 d4l1ya_ :    (GLY57)   (LEU91)   [view usage] : d.151.1.2 |DNase I-like |DNase I-like |Inositol polyphosphate 5-phosphatase (IPP5) |automated matches |Bedbug (Cimex lectularius) [TaxId: 79782]
 d2k2na1 :    (LEU31)   (GLY70)   [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Sensor protein CYB2465 |Synechococcus sp. [TaxId: 1131]
 d1mzjb2 :   (ALA292)  (ASP333)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway |Streptomyces sp. r1128 [TaxId: 140437]
 d1g8ma2 :   (LEU245)  (VAL276)   [view usage] : c.97.1.4 |Cytidine deaminase-like |Cytidine deaminase-like |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |Chicken (Gallus gallus) [TaxId: 9031]
 d2b8ea2 :   (SER514)  (SER547)   [view usage] : d.220.1.1 |Metal cation-transporting ATPase, ATP-binding domain N |Metal cation-transporting ATPase, ATP-binding domain N |Metal cation-transporting ATPase, ATP-binding domain N |Cation-transporting ATPase |Archaeoglobus fulgidus [TaxId: 2234]
 d1tdqb_ :    (ARG85)  (ASP112)   [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Aggrecan core protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4evia2 :   (THR336)  (PRO368)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Linum nodiflorum [TaxId: 407264]
 d3bfca_ :    (VAL26)   (TYR60)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Citrobacter sedlakii [TaxId: 67826]
 d2dg9a_ :    (ILE56)  (LYS105)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FK-506 binding protein (FKBP12), an immunophilin |Human (Homo sapiens) [TaxId: 9606]
 d1wy7d_ :   (PRO152)  (LYS202)   [view usage] : c.66.1.32 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Ta1320-like |Hypothetical protein PH1948 |Pyrococcus horikoshii [TaxId: 53953]
 d4ijea_ :   (SER299)  (ILE340)   [view usage] : d.388.1.1 |Filoviridae VP35-like |Filoviridae VP35-like |Filoviridae VP35 |Filoviridae VP35 |Zaire ebolavirus - Mayinga (Zaire, 1976) [TaxId: 128952]
 d1d2ha_ :   (LEU247)  (GLY292)   [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2qyoa2 :   (GLU326)  (PRO357)   [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |automated matches |Medicago truncatula [TaxId: 3880]
 d1kywc2 :   (THR331)  (VAL365)   [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d2ljma_ :    (ASP39)   (HIS66)   [view usage] : g.3.7.1 |Knottins (small inhibitors, toxins, lectins) |Scorpion toxin-like |Long-chain scorpion toxins |automated matches |Centruroides suffusus [TaxId: 6881]
 d2j5gd_ :     (GLU7)   (HIS30)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
 d1z1ea2 :   (CYS341)  (ALA388)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Peanut (Arachis hypogaea) [TaxId: 3818]
 d1ggoa3 :   (PRO299)  (GLN335)   [view usage] : d.142.1.5 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Pyruvate phosphate dikinase, N-terminal domain |Pyruvate phosphate dikinase, N-terminal domain |Clostridium symbiosum [TaxId: 1512]
 d2ke0a_ :    (ILE67)  (LEU114)   [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d1iruh_ :   (THR148)  (GLY191)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d1jx1c_ :   (ASP126)  (PHE164)   [view usage] : d.36.1.1 |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d4wuma2 :   (CYS341)  (GLU388)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Freesia hybrid [TaxId: 867926]
 d3l27c_ :   (SER299)  (ILE340)   [view usage] : d.388.1.1 |Filoviridae VP35-like |Filoviridae VP35-like |Filoviridae VP35 |Filoviridae VP35 |Zaire ebolavirus - Mayinga (Zaire, 1976) [TaxId: 128952]
 d3j38d_ :     (SER8)   (ALA54)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
 d1k8ba_ :    (ASP62)   (ARG90)   [view usage] : d.241.1.1 |Ribosome binding domain-like |Translation initiation factor 2 beta, aIF2beta, N-terminal domain |Translation initiation factor 2 beta, aIF2beta, N-terminal domain |Translation initiation factor 2 beta, aIF2beta, N-terminal domain |Methanococcus jannaschii [TaxId: 2190]
 d4nl5b_ :    (ARG26)   (TRP57)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3p9ca2 :   (GLU329)  (LYS360)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Lolium perenne [TaxId: 4522]
 d3p8ka_ :   (LEU177)  (PRO218)   [view usage] : d.160.1.0 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d3logd_ :    (VAL36)   (ALA58)   [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
 d1kh0a_ :    (LYS26)   (ALA65)   [view usage] : d.15.7.1 |beta-Grasp (ubiquitin-like) |Immunoglobulin-binding domains |Immunoglobulin-binding domains |Immunoglobulin light chain-binding domain of protein L |Peptostreptococcus magnus [TaxId: 1260]
 d1fp2a2 :   (GLU321)  (PRO352)   [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Isoflavone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d1ioxa_ :    (LYS13)   (ASP35)   [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Betacellulin-2 |Human (Homo sapiens) [TaxId: 9606]
 d3d2la_ :   (GLU203)  (ALA239)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Exiguobacterium sibiricum [TaxId: 262543]
 d2j5sa_ :     (GLU7)   (HIS30)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
 d3sqza2 :   (SER281)  (THR319)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
 d2j5ga_ :     (GLU7)   (HIS30)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
 d3unfb_ :   (THR147)  (VAL187)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3iqba_ :   (MET137)  (LYS179)   [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
 d1hbmb2 :    (GLU83)  (GLN115)   [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Beta chain |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d1yufa_ :    (ASP10)   (SER36)   [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Transforming growth factor alpha |Human (Homo sapiens) [TaxId: 9606]
 d1zg3a2 :   (LYS333)  (PRO364)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
 d1sg9a_ :   (GLN251)  (ARG279)   [view usage] : c.66.1.30 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |N5-glutamine methyltransferase, HemK |N5-glutamine methyltransferase, HemK |Thermotoga maritima [TaxId: 2336]
 d1x9ea2 :   (SER280)  (ALA321)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |3-hydroxy-3-methylglutaryl CoA synthase MvaS |Enterococcus faecalis [TaxId: 1351]
 d1eypa_ :   (GLY125)  (PHE164)   [view usage] : d.36.1.1 |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d2j5gb_ :     (GLU7)   (HIS30)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
 d1omea_ :    (GLU32)   (PHE60)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
 d2j6ja_ :   (PRO299)  (GLU327)   [view usage] : e.76.1.2 |Viral glycoprotein ectodomain-like |Viral glycoprotein ectodomain-like |Spike glycoprotein-like |automated matches |Vesicular stomatitis indiana virus [TaxId: 11277]
 d4pgga2 :   (ARG332)  (LYS362)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Sorghum (Sorghum bicolor) [TaxId: 4558]
 d3vv4a_ :    (ASP11)   (ALA51)   [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
 d2e6ca_ :   (ASP137)  (TRP174)   [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1kija2 :    (GLY31)   (ASN73)   [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA gyrase B |Thermus thermophilus [TaxId: 274]
 d1g8aa_ :   (PRO189)  (THR227)   [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Pyrococcus horikoshii [TaxId: 53953]
 d1a4ua_ :   (THR213)  (ALA243)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Drosophila alcohol dehydrogenase |Fly (Drosophila lebanonensis) [TaxId: 7225]
 d4kqqa2 :   (ASP224)  (PRO266)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d3cq8a2 :   (ARG581)  (ALA629)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
 d1p4ra2 :   (LEU244)  (VAL275)   [view usage] : c.97.1.4 |Cytidine deaminase-like |Cytidine deaminase-like |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |Human (Homo sapiens) [TaxId: 9606]
 d2cqaa1 :    (GLY51)   (GLY82)   [view usage] : b.40.4.14 |OB-fold |Nucleic acid-binding proteins |TIP49 domain |RuvB-like 2 protein, RUVBL2 (TIP49b) |Human (Homo sapiens) [TaxId: 9606]
 d3izbb_ :    (VAL12)   (ILE50)   [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1v9ja_ :    (ALA26)   (SER68)   [view usage] : d.52.6.1 |Alpha-lytic protease prodomain-like |BolA-like |BolA-like |BolA-like protein |Mouse (Mus musculus) [TaxId: 10090]
 d4le5b1 :    (HIS13)   (SER57)   [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Campylobacter jejuni [TaxId: 195099]
 d3spya2 :   (ARG581)  (SER628)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8,     e.3,    d.68,     c.2,    d.58,     i.1,    c.66,    c.14,   d.122,    b.40,    c.37,    c.95,   d.153,   d.151,   d.169,    d.96,     b.6,   d.160,    c.97,   d.110,  
d.278, c.111, d.79, d.142, c.52, a.4, d.150, d.15, d.95, d.93, d.227, d.26, d.130, d.388, d.52, c.106, d.313, e.76, d.161, g.3,
d.36, d.220, d.241, k.41