Tableau information
Concept source: d2ehza2 amino acid (a.a.) range (MET223)(ALA258)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET223) (GLU237) H1
(ILE238) (LEU242) E2
(LEU253) (ALA258) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -119.6° E2
E3 32.7° 129.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3oe2a_ : (PRO96) (GLU128) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Pseudomonas syringae [TaxId: 223283]
d3mvwb_ : (PRO312) (ASN336) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d2dpta_ : (SER34) (PRO63) [view usage] : d.108.1.6 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |LFTR-like |automated matches |Escherichia coli [TaxId: 562]
d1e5pa_ : (PHE3) (TYR39) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Aphrodisin, a sex pheromone |Golden hamster (Mesocricetus auratus) [TaxId: 10036]
d4i3xc_ : (GLU336) (PRO369) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1iw4a_ : (PRO10) (ASN35) [view usage] : g.68.1.1 |Kazal-type serine protease inhibitors |Kazal-type serine protease inhibitors |Ovomucoid domain III-like |Ascidian trypsin inhibitor |Sea squirt (Halocynthia roretzi) [TaxId: 7729]
d1j03a_ : (THR4) (VAL31) [view usage] : d.120.1.2 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Steroid-binding domain |Putative steroid binding protein AT2G24940 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2iaya1 : (LYS23) (SER45) [view usage] : d.376.1.1 |Lp2179-like |Lp2179-like |Lp2179-like |Hypothetical protein Lp2179 |Lactobacillus plantarum [TaxId: 1590]
d3jz4a_ : (GLU333) (ASP374) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3awma_ : (GLY363) (ASN410) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
d3awpa_ : (GLU364) (ASN410) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
d1tvca1 : (ARG34) (LEU69) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Methane monooxygenase component C, MmoC |Methylococcus capsulatus [TaxId: 414]
d2j6lb_ : (THR347) (GLY389) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vloa2 : (LEU7) (HIS29) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Escherichia coli [TaxId: 562]
d1if1b_ : (ASP73) (MET111) [view usage] : a.4.5.23 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Interferon regulatory factor |Interferon regulatory factor 1 (IRF-1) |Mouse (Mus musculus) [TaxId: 10090]
d3qimb_ : (ASP311) (ASN336) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d4i3xb_ : (GLU336) (PRO369) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3sw1a_ : (ALA4) (TYR32) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d1q6ua_ : (SER69) (GLU129) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Peptidyl-prolyl cis-trans isomerase FkpA |Escherichia coli [TaxId: 562]
d3qima_ : (PRO312) (ASN336) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d2x0ga_ : (ASN8) (SER34) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ls5a_ : (PRO223) (THR248) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium falciparum, plasmepsin IV [TaxId: 5833]
d2dptb_ : (SER34) (PRO63) [view usage] : d.108.1.6 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |LFTR-like |automated matches |Escherichia coli [TaxId: 562]
d1yagg_ : (HIS5) (PRO31) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
d2fsra1 : (ARG136) (GLN167) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Probable acetyltranferase Atu2435 |Agrobacterium tumefaciens [TaxId: 358]
d4oera_ : (PRO310) (ASP334) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Brucella suis [TaxId: 29461]
d2fe3a_ : (SER55) (CYS96) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4kl5a_ : (PRO83) (GLY112) [view usage] : b.86.1.0 |Hedgehog/intein (Hint) domain |Hedgehog/intein (Hint) domain |automated matches |automated matches |Nostoc punctiforme [TaxId: 63737]
d3tu5b_ : (HIS5) (PRO31) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qu3b_ : (ARG96) (LEU124) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1p8zg_ : (HIS29) (PRO55) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Human (Homo sapiens) [TaxId: 9606]
d1if1a_ : (LYS75) (MET111) [view usage] : a.4.5.23 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Interferon regulatory factor |Interferon regulatory factor 1 (IRF-1) |Mouse (Mus musculus) [TaxId: 10090]
d2j6la_ : (LYS348) (GLY389) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4lnma_ : (SER231) (ARG281) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 945433]
d4f82b_ : (ALA111) (TYR134) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3awqa_ : (GLU364) (ASN410) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
d2gana1 : (GLU151) (HIS178) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein PH0736 |Pyrococcus horikoshii [TaxId: 53953]
d3a8ia1 : (LEU6) (HIS28) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1wj0a_ : (CYS149) (GLN169) [view usage] : g.72.1.1 |SBT domain |SBT domain |SBT domain |Squamosa-promoter binding-like protein 12, DNA-binding domain |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3a8ka1 : (LEU6) (HIS28) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1mk4a_ : (ASN112) (ASN155) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein YqiY |Bacillus subtilis [TaxId: 1423]
d2d9ia1 : (ILE62) (MET88) [view usage] : d.68.8.1 |IF3-like |SMR domain-like |Smr domain |Nedd4-binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d4i3ta_ : (GLU336) (PRO369) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d4dcxb_ : (PRO312) (ASN336) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d1yx2b1 : (LEU7) (GLN29) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Bacillus subtilis [TaxId: 1423]
d2xzm8_ : (ASN76) (ILE108) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1smjd_ : (GLN403) (LYS449) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d4cbug_ : (HIS29) (PRO55) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4f82a_ : (ALA111) (TYR134) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2stta_ : (GLU77) (VAL105) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Human (Homo sapiens) [TaxId: 9606]
d2fb5b_ : (ASN131) (LYS156) [view usage] : d.320.1.1 |YojJ-like |YojJ-like |YojJ-like |Hypothetical protein BC4920 (YojJ) |Bacillus cereus [TaxId: 1396]
d1yk3e_ : (ASN173) (GLU204) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d1yx2a1 : (LEU7) (GLN29) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Bacillus subtilis [TaxId: 1423]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.94, a.104, d.68, i.1, c.82, b.50, d.144, c.47, b.60, d.32, d.108, d.110, d.250, a.4, d.109, b.43, d.26, d.120, g.68,
b.86, d.320, d.376, g.72