Tableau information
Concept source: d1y98a2 amino acid (a.a.) range (THR1777)(GLN1811)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR1777) (GLY1788) H1
(SER1790) (GLU1794) E2
(HIS1805) (GLN1811) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 145.1° E2
E3 146.9° -64.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2cbja3 : (GLU76) (GLY107) [view usage] : d.92.2.3 |Zincin-like |beta-N-acetylhexosaminidase-like domain |Hyaluronidase N-terminal domain-like |Hyaluronidase N-terminal domain |Clostridium perfringens [TaxId: 1502]
d3r9qb_ : (GLY33) (HIS84) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d1t3xa_ : (TYR45) (GLY67) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1yv2a_ : (GLY328) (ASP359) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d2vbua_ : (PRO25) (ASN68) [view usage] : b.43.5.2 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |CTP-dependent riboflavin kinase-like |CTP-dependent riboflavin kinase, Rfk |Methanococcus jannaschii [TaxId: 2190]
d2v1ob_ : (GLY32) (SER72) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ly8a_ : (SER264) (ASN303) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
d1mqpa2 : (LEU46) (THR71) [view usage] : d.92.2.2 |Zincin-like |beta-N-acetylhexosaminidase-like domain |alpha-D-glucuronidase, N-terminal domain |alpha-D-glucuronidase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d1cx8a2 : (SER338) (SER378) [view usage] : c.8.4.1 |The "swivelling" beta/beta/alpha domain |PA domain |PA domain |Transferrin receptor ectodomain, apical domain |Human (Homo sapiens) [TaxId: 9606]
d1k9da2 : (LEU46) (THR71) [view usage] : d.92.2.2 |Zincin-like |beta-N-acetylhexosaminidase-like domain |alpha-D-glucuronidase, N-terminal domain |alpha-D-glucuronidase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d1sr8a_ : (ARG217) (PHE254) [view usage] : e.54.1.1 |CbiD-like |CbiD-like |CbiD-like |Cobalamin biosynthesis protein CbiD |Archaeoglobus fulgidus [TaxId: 2234]
d1mqqa2 : (LEU46) (THR71) [view usage] : d.92.2.2 |Zincin-like |beta-N-acetylhexosaminidase-like domain |alpha-D-glucuronidase, N-terminal domain |alpha-D-glucuronidase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d1i5ga_ : (PHE8) (SER37) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
d1c7sa4 : (LYS246) (ILE274) [view usage] : d.92.2.1 |Zincin-like |beta-N-acetylhexosaminidase-like domain |beta-N-acetylhexosaminidase domain |Bacterial chitobiase, Domain 2 |Serratia marcescens [TaxId: 615]
d4pf8a_ : (ASN209) (LEU237) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Sulfitobacter sp. [TaxId: 314267]
d4foxh_ : (THR2) (ASP37) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3r9qc_ : (GLY33) (HIS84) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d1k9ea2 : (SER32) (THR71) [view usage] : d.92.2.2 |Zincin-like |beta-N-acetylhexosaminidase-like domain |alpha-D-glucuronidase, N-terminal domain |alpha-D-glucuronidase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d4dwoa_ : (ASP122) (ASP158) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d3qe2b2 : (THR494) (LYS518) [view usage] : b.43.4.1 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |NADPH-cytochrome p450 reductase FAD-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3r9qa_ : (GLY33) (HIS84) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.94, c.108, d.117, d.92, c.14, a.93, c.47, c.8, d.38, d.109, b.43, c.15, e.54