Tableau information
Concept source: d1autc_ amino acid (a.a.) range (ASP125)(ILE160)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP125) (GLN131) H1
(GLN134) (GLY140) E2
(VAL154) (ILE160) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -92.7° E2
E3 79.2° 158.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3mlaa_ : (ASN118) (ILE149) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1th0a_ : (GLU370) (THR398) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 2, SENP2 |Human (Homo sapiens) [TaxId: 9606]
d3dv2a_ : (ASN118) (PRO150) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2io1a_ : (THR369) (THR398) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 2, SENP2 |Human (Homo sapiens) [TaxId: 9606]
d1bvaa_ : (GLU201) (LYS226) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Cytochrome c peroxidase, CCP |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2phcb1 : (SER110) (GLY139) [view usage] : b.62.1.4 |Cyclophilin-like |Cyclophilin-like |PH0987 C-terminal domain-like |Uncharacterized protein PH0987 |Pyrococcus horikoshii [TaxId: 53953]
d1nywb_ : (GLU52) (ALA77) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Streptococcus suis [TaxId: 1307]
d2vzoa5 : (LEU792) (ASN825) [view usage] : b.1.4.0 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 31958]
d3u0gf_ : (THR28) (ILE53) [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1ar71_ : (THR177) (PRO197) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d2gmia1 : (SER45) (THR73) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]
d1irue_ : (PHE22) (GLU51) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Cow (Bos taurus) [TaxId: 9913]
d1xhna1 : (ASP105) (LYS122) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Cellular repressor of E1A-stimulated genes CREG1 |Human (Homo sapiens) [TaxId: 9606]
d1reaa2 : (PHE270) (TYR293) [view usage] : d.48.1.1 |Anti-LPS factor/recA domain |RecA protein, C-terminal domain |RecA protein, C-terminal domain |RecA protein, C-terminal domain |Escherichia coli [TaxId: 562]
d1qjsa2 : (HIS225) (VAL249) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Hemopexin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1ri1a_ : (ARG177) (LEU217) [view usage] : c.66.1.34 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap (Guanine N-7) methyltransferase |mRNA cap (Guanine N-7) methyltransferase |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
d3ourb_ : (ASP95) (ASP124) [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |automated matches |Vibrio vulnificus [TaxId: 216895]
d3a3da_ : (PRO411) (GLY432) [view usage] : e.3.1.3 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |Dac-like |DD-carboxypeptidase DacB |Haemophilus influenzae [TaxId: 727]
d3bgra1 : (HIS221) (VAL241) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1f13a4 : (ALA428) (VAL452) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1jpmc1 : (ASP323) (LYS349) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |L-Ala-D/L-Glu epimerase |Bacillus subtilis [TaxId: 1423]
d1nxma_ : (GLU52) (ALA77) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Streptococcus suis [TaxId: 1307]
d3e27a_ : (ILE119) (PRO150) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1xsia2 : (GLU43) (ILE69) [view usage] : b.30.5.11 |Supersandwich |Galactose mutarotase-like |YicI N-terminal domain-like |Putative glucosidase YicI, N-terminal domain |Escherichia coli [TaxId: 562]
d2qtma_ : (ASN118) (PRO150) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1gpra_ : (ASP87) (ASP118) [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |Glucose permease IIa domain, IIa-glc |Bacillus subtilis [TaxId: 1423]
d1iqdc_ : (SER2186) (SER2204) [view usage] : b.18.1.2 |Galactose-binding domain-like |Galactose-binding domain-like |Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) |C2 domain of factor VIII |Human (Homo sapiens) [TaxId: 9606]
d2mp0b_ : (ASP394) (ASP423) [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |Glucose-specific factor III (glsIII) |Escherichia coli [TaxId: 562]
d1ax3a_ : (ASP87) (ASP116) [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |Glucose permease IIa domain, IIa-glc |Bacillus subtilis [TaxId: 1423]
d1qrka4 : (ALA428) (VAL452) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1jpma1 : (ASP323) (LYS349) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |L-Ala-D/L-Glu epimerase |Bacillus subtilis [TaxId: 1423]
d1ev11_ : (THR164) (PRO184) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Human enterovirus B coat proteins |Human echovirus 1 [TaxId: 46633]
d3hb6a_ : (SER180) (ASN203) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Proteus mirabilis [TaxId: 584]
d1e63a1 : (GLY87) (GLY115) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Anabaena sp., pcc 7119 [TaxId: 1167]
d4bcua_ : (LYS9) (ASN46) [view usage] : b.121.7.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Satellite viruses |Satellite viruses |STNV coat protein |Satellite tobacco necrosis virus [TaxId: 12881]
d1th0b_ : (GLU370) (THR398) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 2, SENP2 |Human (Homo sapiens) [TaxId: 9606]
d3wz1a_ : (GLU162) (GLN184) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Microbulbifer thermotolerans [TaxId: 252514]
d1ex0a4 : (ALA428) (THR458) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1u8va2 : (CYS235) (PRO268) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |4-hydroxybutyryl-CoA dehydratase AbfD, NM domains |Clostridium aminobutyricum [TaxId: 33953]
d1ekfa_ : (SER66) (LEU90) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |Branched-chain aminoacid aminotransferase |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d1vtz0_ : (THR12) (ASN46) [view usage] : b.121.7.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Satellite viruses |Satellite viruses |STNV coat protein |Satellite tobacco necrosis virus [TaxId: 12881]
d3iwzc1 : (ASP23) (PHE46) [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d2vzua5 : (LEU792) (ASN825) [view usage] : b.1.4.0 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 31958]
d3uyyb_ : (ALA63) (PHE92) [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Deinococcus radiodurans [TaxId: 1299]
d1f3ga_ : (ASP94) (PRO125) [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |Glucose-specific factor III (glsIII) |Escherichia coli [TaxId: 562]
d1irud_ : (GLN18) (VAL45) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Cow (Bos taurus) [TaxId: 9913]
d3ugua2 : (ASP317) (HIS357) [view usage] : b.1.18.11 |Immunoglobulin-like beta-sandwich |E set domains |Arrestin/Vps26-like |automated matches |Cow (Bos taurus) [TaxId: 9913]
d2ixlc_ : (GLU52) (ALA77) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Streptococcus suis [TaxId: 1307]
d4ewpa2 : (ASN323) (VAL346) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Micrococcus luteus [TaxId: 465515]
d1n26a1 : (GLU32) (GLY57) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Interleukin-6 receptor alpha chain, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1ex0b4 : (ALA428) (THR458) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1vsyd_ : (GLN4019) (CYS4046) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1maeh_ : (ALA290) (GLY317) [view usage] : b.69.2.1 |7-bladed beta-propeller |YVTN repeat-like/Quinoprotein amine dehydrogenase |Methylamine dehydrogenase, H-chain |Methylamine dehydrogenase, H-chain |Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, e.5, e.3, c.1, b.82, b.69, b.29, c.26, b.30, b.47, c.66, a.93, e.6, c.95, d.153, b.18, b.121, d.3, e.17, b.1,
b.45, d.20, b.62, b.84, b.43, b.66, d.48