Tableau information
Concept source: d2a07f1 amino acid (a.a.) range (ASN544)(VAL575)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN544) (LEU558) H1
(CYS561) (ASN567) E2
(GLY570) (VAL575) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -86.9° E2
E3 76.7° 150.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fy7a_ : (TYR265) (GLU293) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase ESA1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1qrkb4 : (GLU198) (GLY228) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1poca_ : (LYS25) (SER60) [view usage] : a.133.1.1 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Insect phospholipase A2 |Phospholipase A2 |Honeybee (Apis mellifera) [TaxId: 7460]
d3cnqs_ : (TYR171) (PRO201) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
d1kaqa_ : (LYS118) (ASP148) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Bacillus subtilis [TaxId: 1423]
d3ga3a_ : (THR932) (CYS962) [view usage] : b.88.2.1 |Mss4-like |RIG-I C-terminal-like |RIG-I C-terminal domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3mmgb_ : (ASN68) (LYS86) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Tobacco vein mottling virus [TaxId: 12228]
d1ueab_ : (GLY158) (SER181) [view usage] : b.40.3.1 |OB-fold |TIMP-like |Tissue inhibitor of metalloproteinases, TIMP |TIMP-1 |Human (Homo sapiens) [TaxId: 9606]
d1tvkb1 : (SER40) (PRO61) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Cow (Bos taurus) [TaxId: 9913]
d2rdxa2 : (ASP321) (THR347) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Roseovarius nubinhibens [TaxId: 89187]
d3cdkc_ : (THR127) (ARG147) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3dl9a_ : (GLU451) (ARG500) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Vitamin D 25-hydroxylase Cyp2R1 |Human (Homo sapiens) [TaxId: 9606]
d1xmda1 : (GLN158) (TYR179) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
d1nz0b_ : (ASP16) (LYS38) [view usage] : d.14.1.2 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |RNase P protein |RNase P protein |Thermotoga maritima [TaxId: 2336]
d1dp5a_ : (SER61) (ASP87) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]
d3tewa2 : (PRO184) (PRO205) [view usage] : b.179.1.1 |Anthrax protective antigen N-terminal-like |PA14-like |PA14 |PA14 |Bacillus anthracis
d2akla1 : (SER41) (ASP57) [view usage] : b.34.11.2 |SH3-like barrel |Prokaryotic SH3-related domain |PhnA-like |Hypothetical protein PA0128, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
d1ka0a_ : (LEU3) (THR46) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |3';5'-adenosine bisphosphatase, PAP phosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1guva2 : (TYR303) (ASP330) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Chitotriosidase |Human (Homo sapiens) [TaxId: 9606]
d3k9va_ : (ARG466) (PRO513) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3c6qa_ : (GLN258) (THR279) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1gw0a1 : (ALA108) (ARG128) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d1nz0c_ : (ASP16) (LYS38) [view usage] : d.14.1.2 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |RNase P protein |RNase P protein |Thermotoga maritima [TaxId: 2336]
d1twye_ : (SER153) (ALA178) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ABC transporter, periplasmic substrate-binding protein VCA0807 |Vibrio cholerae [TaxId: 666]
d4jg4a_ : (ASN13) (ASP37) [view usage] : d.14.1.0 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1cyqa_ : (THR4) (ALA47) [view usage] : d.4.1.3 |His-Me finger endonucleases |His-Me finger endonucleases |Intron-encoded homing endonucleases |Intron-encoded homing endonuclease I-PpoI |Slime mold (Physarum polycephalum) [TaxId: 5791]
d3ppsa1 : (ALA109) (PHE128) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Thielavia arenaria [TaxId: 113610]
d1ac5a_ : (SER80) (GLY105) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |Serine carboxypeptidase II |Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
d1ni7a_ : (PRO48) (GLU73) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |Hypothetical protein YgdK |Escherichia coli [TaxId: 562]
d3fz6e_ : (ASP291) (PHE313) [view usage] : c.67.1.6 |PLP-dependent transferase-like |PLP-dependent transferases |Pyridoxal-dependent decarboxylase |Glutamate decarboxylase beta, GadB |Escherichia coli K-12 [TaxId: 83333]
d1cgpa1 : (ASP138) (LYS166) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Catabolite gene activator protein (CAP), C-terminal domain |Escherichia coli [TaxId: 562]
d1qhoa4 : (ASP179) (LEU199) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
d1nz0d_ : (ARG12) (LYS38) [view usage] : d.14.1.2 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |RNase P protein |RNase P protein |Thermotoga maritima [TaxId: 2336]
d1l9ma4 : (HIS148) (GLY178) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d2chra1 : (ILE325) (GLY351) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Chlormuconate cycloisomerase |Alcaligenes eutrophus [TaxId: 106590]
d1j7ia_ : (SER7) (GLY36) [view usage] : d.144.1.6 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |APH phosphotransferases |Type IIIa 3',5"-aminoglycoside phosphotransferase |Enterococcus faecalis [TaxId: 1351]
d1l9mb4 : (HIS148) (GLY178) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d4ffba1 : (GLY49) (PRO64) [view usage] : c.32.1.0 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1if1b_ : (TRP11) (PRO37) [view usage] : a.4.5.23 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Interferon regulatory factor |Interferon regulatory factor 1 (IRF-1) |Mouse (Mus musculus) [TaxId: 10090]
d1ef7a_ : (ASP104) (ASN123) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin X |Human (Homo sapiens) [TaxId: 9606]
d1kcza2 : (GLN20) (GLY36) [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |beta-Methylaspartase |Clostridium tetanomorphum [TaxId: 1553]
d2hiwa_ : (GLY401) (PRO420) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4i4tb1 : (ASP41) (PRO63) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1g0da4 : (ASP147) (GLY178) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Red sea bream (Chrysophrys major) [TaxId: 143350]
d1pkpa2 : (ASN5) (ASP41) [view usage] : d.50.1.2 |dsRBD-like |dsRNA-binding domain-like |Ribosomal S5 protein, N-terminal domain |Ribosomal S5 protein, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d1bs2a2 : (SER298) (LEU326) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Arginyl-tRNA synthetase (ArgRS) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2hgjk1 : (ALA94) (ALA146) [view usage] : d.99.1.1 |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Thermus thermophilus [TaxId: 274]
d1a6fa_ : (ASN13) (LEU36) [view usage] : d.14.1.2 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |RNase P protein |RNase P protein |Bacillus subtilis [TaxId: 1423]
d1ef0a3 : (ASN311) (THR341) [view usage] : d.95.2.2 |Homing endonuclease-like |Homing endonucleases |Intein endonuclease |VMA1-derived endonuclease (VDE) PI-SceI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ivya_ : (SER61) (TYR84) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |Human 'protective protein', HPP |Human (Homo sapiens) [TaxId: 9606]
d2rdea1 : (ASN223) (ASN247) [view usage] : b.45.2.1 |Split barrel-like |PilZ domain-like |PilZ domain |Hypothetical protein VCA0042, C-terminal domain |Vibrio cholerae O395 [TaxId: 345073]
d1qrka4 : (ASN197) (GLY228) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d3smpb1 : (VAL267) (PHE312) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 1, PANK1 |Human (Homo sapiens) [TaxId: 9606]
d1vs6r1 : (LYS10) (HIS66) [view usage] : b.155.1.1 |L21p-like |L21p-like |Ribosomal protein L21p |Ribosomal protein L21p |Escherichia coli [TaxId: 562]
d1nugb4 : (HIS148) (GLY178) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d3l28a_ : (PRO304) (ILE340) [view usage] : d.388.1.1 |Filoviridae VP35-like |Filoviridae VP35-like |Filoviridae VP35 |Filoviridae VP35 |Zaire ebolavirus - Mayinga (Zaire, 1976) [TaxId: 128952]
d2dgkc_ : (ASP291) (PHE313) [view usage] : c.67.1.6 |PLP-dependent transferase-like |PLP-dependent transferases |Pyridoxal-dependent decarboxylase |Glutamate decarboxylase beta, GadB |Escherichia coli [TaxId: 562]
d3p83d_ : (PHE-4) (ALA23) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3cdka_ : (THR127) (ARG147) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1nz0a_ : (ARG12) (LYS38) [view usage] : d.14.1.2 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |RNase P protein |RNase P protein |Thermotoga maritima [TaxId: 2336]
d2gzwb1 : (VAL139) (LYS166) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Catabolite gene activator protein (CAP), C-terminal domain |Escherichia coli [TaxId: 562]
d3ly6a2 : (SER152) (GLY183) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), tissue isozyme [TaxId: 9606]
d1xmca1 : (GLN158) (TYR179) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
d1if1a_ : (TRP11) (PRO37) [view usage] : a.4.5.23 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Interferon regulatory factor |Interferon regulatory factor 1 (IRF-1) |Mouse (Mus musculus) [TaxId: 10090]
d3zdsa_ : (PRO35) (TYR65) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d1ghsa_ : (SER181) (THR203) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
d3c6ga1 : (GLU451) (ARG500) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Vitamin D 25-hydroxylase Cyp2R1 |Human (Homo sapiens) [TaxId: 9606]
d1kv9a2 : (ASN266) (THR289) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase, N-terminal domain |Pseudomonas putida, hk5 [TaxId: 303]
d1sg7a1 : (ASP65) (LYS94) [view usage] : a.239.1.1 |ChaB-like |ChaB-like |ChaB-like |Putative cation transport regulator ChaB |Escherichia coli [TaxId: 562]
d3ro6a2 : (ASP321) (ARG347) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Methylococcus capsulatus [TaxId: 414]
d4v198_ : (LYS108) (ARG125) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d1kkoa2 : (ASP19) (GLY36) [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |beta-Methylaspartase |Citrobacter amalonaticus [TaxId: 35703]
d1kd0a2 : (GLN20) (GLY36) [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |beta-Methylaspartase |Clostridium tetanomorphum [TaxId: 1553]
d4lnub1 : (ASP41) (PRO63) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d1t66d1 : (SER63) (ASN87) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 1 [TaxId: 10090]
d1ehxa_ : (GLN39) (ALA54) [view usage] : b.1.18.13 |Immunoglobulin-like beta-sandwich |E set domains |Cellulosomal scaffoldin protein CipC, module x2.1 |Cellulosomal scaffoldin protein CipC, module x2.1 |Clostridium cellulolyticum [TaxId: 1521]
d3daoa_ : (TRP170) (ALA188) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Eubacterium rectale
d3e27b_ : (ILE119) (GLU148) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3rita2 : (ASP321) (ARG347) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Methylococcus capsulatus [TaxId: 414]
d3rycb1 : (ASP41) (PRO63) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d1xl7a1 : (GLN158) (TYR179) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
d1ieha_ : (ALA61) (ASN84) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Llama (Lama glama) [TaxId: 9844]
d1n97a_ : (ARG339) (GLU385) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp175a1 |Thermus thermophilus [TaxId: 274]
d1bqqt_ : (GLY1159) (ALA1181) [view usage] : b.40.3.1 |OB-fold |TIMP-like |Tissue inhibitor of metalloproteinases, TIMP |TIMP-2 |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, c.1, b.82, c.67, c.69, c.94, a.104, i.1, c.108, c.26, b.47, c.124, c.93, b.50, d.144, b.40, c.55, d.14, d.3, c.32,
b.6, e.7, b.1, b.45, d.108, c.43, c.41, b.179, b.34, a.4, b.88, d.95, d.54, d.26, a.133, d.4, d.224, d.388, d.50, a.239,
d.99, b.155