Tableau information
Concept source: d1hb5c_ amino acid (a.a.) range (PRO250)(GLN277)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO250) (SER255) H1
(SER255) (GLY267) E2
(ASN271) (GLN277) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 32.2° E2
E3 119.8° 149.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1hava_ : (SER1) (MET29) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human hepatitis A virus [TaxId: 208726]
d1hqna2 : (PRO250) (GLN277) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d1n76a1 : (ASP220) (PRO238) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d4pkba_ : (ALA190) (LEU213) [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
d1r7lb_ : (PRO3) (GLY33) [view usage] : d.277.1.1 |Bacillus phage protein |Bacillus phage protein |Bacillus phage protein |Bacillus phage protein |Bacillus cereus [TaxId: 1396]
d4l8fa_ : (THR262) (ASN291) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1vrma1 : (SER154) (VAL181) [view usage] : d.96.2.1 |T-fold |ApbE-like |ApbE-like |Hypothetical protein TM1553 |Thermotoga maritima [TaxId: 2336]
d1thva_ : (THR167) (PHE203) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Thaumatin |Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]
d3r31a_ : (PRO114) (VAL153) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d4iyaa_ : (ASN258) (VAL280) [view usage] : f.6.1.0 |Leukocidin-like |Leukocidin-like |automated matches |automated matches |Staphylococcus phage [TaxId: 71366]
d1v9fa_ : (SER264) (PRO300) [view usage] : d.265.1.3 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase RsuA/RluD |Ribosomal large subunit pseudouridine synthase D, RluD |Escherichia coli [TaxId: 562]
d2b51a1 : (SER167) (ASP188) [view usage] : d.218.1.10 |Nucleotidyltransferase |Nucleotidyltransferase |RNA editing terminal uridyl transferase 2, RET2, catalytic domain |RNA editing terminal uridyl transferase 2, TUTase 2, RET2 |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d4l8wb_ : (THR262) (ASN291) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1auna_ : (THR166) (CYS205) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Pathogenesis-related protein 5d |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1bd9b_ : (PRO79) (PRO112) [view usage] : b.17.1.1 |PEBP-like |PEBP-like |Phosphatidylethanolamine binding protein |Phosphatidylethanolamine binding protein, PEBP |Human (Homo sapiens) [TaxId: 9606]
d1rqwa_ : (THR167) (CYS204) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Thaumatin |Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]
d3od7a_ : (SER75) (ASP108) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
d1fod1_ : (ASP31) (ASP52) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Aphthovirus (Foot-and-mouth disease virus) coat proteins |FMDV (Foot-and-mouth disease virus), strain bfs, 1860 [TaxId: 12110]
d1zata2 : (ASP261) (VAL297) [view usage] : d.335.1.1 |L,D-transpeptidase pre-catalytic domain-like |L,D-transpeptidase pre-catalytic domain-like |L,D-transpeptidase pre-catalytic domain-like |L,D-transpeptidase, pre-catalytic domain |Enterococcus faecium [TaxId: 1352]
d4l7qa_ : (THR262) (ASN291) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d4dj6f_ : (GLY4) (ALA36) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/netherlands/219/2003(h7n7)) [TaxId: 680693]
d2blra_ : (THR167) (PHE203) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |automated matches |Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]
d1b94a_ : (GLU82) (LEU107) [view usage] : c.52.1.2 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRV |Restriction endonuclease EcoRV |Escherichia coli [TaxId: 562]
d1l9xa_ : (GLU265) (ASP294) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |gamma-glutamyl hydrolase |Human (Homo sapiens) [TaxId: 9606]
d3s3ea_ : (ASP95) (GLN119) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2ooqb_ : (ASP959) (GLN983) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3aoka_ : (THR167) (PHE203) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |automated matches |Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]
d1cmoa_ : (VAL52) (VAL74) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Human (Homo sapiens) [TaxId: 9606]
d1nyna_ : (SER34) (SER64) [view usage] : d.235.1.1 |FYSH domain |FYSH domain |Hypothetical protein Yhr087W |Hypothetical protein Yhr087W |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1cjdb2 : (PRO250) (ALA279) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d1hb5c_ : (PRO250) (GLN277) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d1z3qa_ : (THR161) (PHE198) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |automated matches |Musa acuminata [TaxId: 4641]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, c.82, b.47, c.45, i.6, c.23, b.121, b.2, d.96, c.19, c.52, b.25, h.3, d.218, b.17, d.265, f.6, d.277, d.335, d.235