Tableau information
Concept source: d1dewb_ amino acid (a.a.) range (ASN272)(LYS303)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN272) (ASN277) H1
(ASP283) (SER288) E2
(SER298) (LYS303) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 50.8° E2
E3 -126.7° 167.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1o9ld1 : (THR163) (SER184) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d3vehb_ : (ARG382) (LEU402) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d3mgaa1 : (SER9) (GLN39) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d1fbla1 : (PHE316) (PHE343) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Collagenase (MMP1), C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2d4ec_ : (TYR138) (GLY164) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Thermus thermophilus [TaxId: 300852]
d2r7da2 : (SER131) (LEU154) [view usage] : b.40.4.16 |OB-fold |Nucleic acid-binding proteins |RNB domain-like |Ribonuclease II family protein DR0020 |Deinococcus radiodurans [TaxId: 1299]
d3ba0a2 : (LEU320) (LYS348) [view usage] : b.66.1.0 |4-bladed beta-propeller |Hemopexin-like domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kywa2 : (LEU232) (GLY249) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d2hgjg1 : (ARG96) (VAL160) [view usage] : d.77.1.1 |RL5-like |RL5-like |Ribosomal protein L5 |Ribosomal protein L5 |Thermus thermophilus [TaxId: 274]
d3qi9a2 : (GLU254) (GLY280) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |CD1, alpha-3 domain |Mouse (Mus musculus) [TaxId: 10090]
d3e91b_ : (LEU141) (TYR161) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d3ob7c_ : (HIS28) (LEU56) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Human (Homo sapiens) [TaxId: 9606]
d1neka1 : (ASP549) (LYS576) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydogenase |Escherichia coli [TaxId: 562]
d3i5va_ : (GLY123) (ASP155) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 561307]
d3mgab1 : (SER9) (GLN39) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d2u2fa_ : (ASN54) (GLN76) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor U2AF 65 KDa subunit |Human (Homo sapiens) [TaxId: 9606]
d2euaa1 : (ARG365) (VAL384) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Menaquinone-specific isochorismate synthase MenF |Escherichia coli [TaxId: 562]
d3bzna_ : (ARG365) (VAL384) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |automated matches |Escherichia coli [TaxId: 562]
d4lf2e1 : (ASP63) (ALA85) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 258594]
d1r18a_ : (ASP26) (PRO62) [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4h1ia_ : (HIS28) (LEU56) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Human (Homo sapiens) [TaxId: 9606]
d2z9lb_ : (LEU141) (HIS164) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d2q87a_ : (THR77) (PHE108) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tk8a_ : (TRP96) (LYS124) [view usage] : b.81.1.2 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1tlba_ : (SER79) (ASN141) [view usage] : d.248.1.1 |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4gafb3 : (GLU285) (TYR312) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Type-1 interleukin-1 receptor |Human (Homo sapiens) [TaxId: 9606]
d3f1ex_ : (ASN188) (PRO225) [view usage] : e.38.1.0 |Release factor |Release factor |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
d1cd2a_ : (HIS174) (ASP205) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Fungus (Pneumocystis carinii) [TaxId: 4754]
d3u5ct_ : (VAL73) (ASP95) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d3i5vc_ : (GLY123) (ASP155) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 561307]
d2ix1a4 : (SER239) (LEU262) [view usage] : b.40.4.16 |OB-fold |Nucleic acid-binding proteins |RNB domain-like |Exoribonuclease 2, RNB |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.81, d.58, i.1, c.82, b.47, d.117, c.66, c.124, b.40, d.151, d.248, c.71, b.1, e.38, b.66, a.7, d.161, d.77