Tableau information
Concept source: d3ek5b_ amino acid (a.a.) range (ASP177)(ASP209)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP177) (SER183) E1
(THR185) (GLY193) H2
(THR199) (ASP209) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -147.7° H2
H3 40.4° -153.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1rrma_ : (ASP90) (VAL119) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Lactaldehyde reductase FucO |Escherichia coli [TaxId: 562]
d2arhb_ : (HIS148) (GLU196) [view usage] : d.108.1.9 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |Aq_1966-like |Hypothetical protein Aq_1966 |Aquifex aeolicus [TaxId: 63363]
d2f36a_ : (THR5) (GLU33) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1b71a1 : (ALA77) (GLY145) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Rubrerythrin, N-terminal domain |Desulfovibrio vulgaris [TaxId: 881]
d4tn1b1 : (TYR709) (TYR744) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Chaetomium thermophilum [TaxId: 209285]
d2j4jf_ : (ASP154) (SER195) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d1veqa_ : (SER96) (GLU157) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Mycobacterium smegmatis [TaxId: 1772]
d3du7b1 : (ARG2) (ILE49) [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Tubulin:stathmin-like domain complex |Cow (Bos taurus) [TaxId: 9913]
d4bqfb_ : (LEU566) (THR605) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1rrmb_ : (ASP90) (VAL119) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Lactaldehyde reductase FucO |Escherichia coli [TaxId: 562]
d1r9ja2 : (ASP58) (PHE90) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Leishmania mexicana mexicana [TaxId: 44270]
d2pbea1 : (TYR142) (ILE185) [view usage] : a.160.1.5 |PAP/OAS1 substrate-binding domain |PAP/OAS1 substrate-binding domain |AadK C-terminal domain-like |Aminoglycoside 6-adenylyltransferase AadK |Bacillus subtilis [TaxId: 1423]
d1uwba2 : (ASP237) (ARG284) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d4tmza1 : (VAL710) (TYR744) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Chaetomium thermophilum [TaxId: 209285]
d3m49b1 : (ASP60) (PHE92) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d3m49a1 : (ASP60) (PHE92) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1wvja_ : (VAL6) (GLU33) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d1p8ta_ : (GLY280) (GLN307) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |Reticulon 4 receptor (Nogo-66 receptor, Ngr) |Human (Homo sapiens) [TaxId: 9606]
d2bi4a_ : (ASP90) (VAL119) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |automated matches |Escherichia coli [TaxId: 562]
d3wo9a_ : (GLU189) (VAL245) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Lethenteron camtschaticum [TaxId: 980415]
d2d37a_ : (TYR64) (ILE91) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2j0wa1 : (ALA236) (THR263) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Escherichia coli [TaxId: 562]
d4jkxa_ : (LEU4) (ARG52) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d4a7xa_ : (ASP179) (LYS211) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d1jkua_ : (TYR130) (LYS195) [view usage] : a.25.1.3 |Ferritin-like |Ferritin-like |Manganese catalase (T-catalase) |Manganese catalase (T-catalase) |Lactobacillus plantarum [TaxId: 1590]
d2d38a_ : (TYR64) (ILE91) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1ay0a1 : (ASP61) (PHE93) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2fkia1 : (SER79) (LEU118) [view usage] : d.198.3.1 |Secretion chaperone-like |YjbR-like |YjbR-like |Hypothetical protein YjbR |Escherichia coli [TaxId: 562]
d2bmua_ : (THR155) (GLY196) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |automated matches |Pyrococcus furiosus [TaxId: 2261]
d3ek6b_ : (ASP177) (ASP209) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Xanthomonas campestris pv. campestris [TaxId: 340]
d1onka_ : (LEU4) (ARG52) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.10, c.94, d.165, e.22, c.37, c.36, c.87, b.45, d.108, c.73, a.25, i.10, a.160, d.198