Tableau information
Concept source: d3r77b_ amino acid (a.a.) range (ARG31)(ASN69)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG31) (VAL36) E1
(GLN40) (ARG45) H2
(ASP49) (ASN69) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -60.9° H2
H3 -151.6° 144.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4kqga_ : (GLU60) (GLY95) [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |automated matches |Salmonella enterica [TaxId: 99287]
d2b34a_ : (ASN14) (SER51) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1kzxa_ : (SER4) (ASP34) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Intestinal fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d2rdua_ : (PRO74) (LEU101) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1svda1 : (ASP317) (ARG343) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Halothiobacillus neapolitanus [TaxId: 927]
d3r77b_ : (ARG31) (ASN69) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Phenazine biosynthesis protein PhzD |Pseudomonas fluorescens [TaxId: 294]
d1x9ga_ : (GLY11) (VAL48) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Ribonuclease MAR1 |Leishmania donovani [TaxId: 5661]
d3ewma_ : (LEU156) (ALA186) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1yzva_ : (LYS12) (GLY49) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d4kqfa_ : (GLU60) (GLY95) [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |automated matches |Salmonella enterica [TaxId: 99287]
d1jh8a_ : (GLU60) (GLY95) [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Salmonella typhimurium [TaxId: 90371]
d3txya_ : (THR9) (LYS49) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1v7nv_ : (THR37) (LEU81) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |Thrombopoietin |Human (Homo sapiens) [TaxId: 9606]
d4pbga_ : (PHE11) (TYR56) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |6-phospho-beta-D-galactosidase, PGAL |Lactococcus lactis [TaxId: 1358]
d2r82a3 : (MET103) (ASP142) [view usage] : d.142.1.5 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Pyruvate phosphate dikinase, N-terminal domain |Pyruvate phosphate dikinase, N-terminal domain |Clostridium symbiosum [TaxId: 1512]
d1grha_ : (ARG45) (HIS122) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Glutathione reductase |Human (Homo sapiens) [TaxId: 9606]
d3d1ja_ : (MET1) (ALA25) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3tb4a_ : (ARG28) (ALA68) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
d1yaca_ : (ASP12) (ASN51) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |YcaC |Escherichia coli [TaxId: 562]
d1ko5a_ : (ASN104) (LEU141) [view usage] : c.37.1.17 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Gluconate kinase |Gluconate kinase |Escherichia coli [TaxId: 562]
d2rdwa_ : (PRO74) (LEU101) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nf9a_ : (ARG31) (GLN69) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Phenazine biosynthesis protein PhzD |Pseudomonas aeruginosa [TaxId: 287]
d3r77a_ : (ARG31) (ASN69) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Phenazine biosynthesis protein PhzD |Pseudomonas fluorescens [TaxId: 294]
d3tg2a_ : (ARG28) (ALA68) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
d1xn4a_ : (GLY11) (VAL48) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Ribonuclease MAR1 |Leishmania major [TaxId: 5664]
d3t57a_ : (ARG246) (ILE277) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.81, c.72, c.39, c.37, b.60, c.87, c.33, d.142, i.12, a.26