Tableau information
Concept source: d2feab_ amino acid (a.a.) range (PRO94)(ILE119)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO94) (GLY100) E1
(PHE105) (GLU111) H2
(GLU115) (ILE119) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 145.9° H2
H3 -49.3° 142.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4nr0a_ : (LEU35) (PHE63) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1t0aa_ : (LYS2) (PRO64) [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |Shewanella oneidensis [TaxId: 70863]
d4m9ce_ : (THR2) (ALA34) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d4hv4a2 : (PRO280) (PHE321) [view usage] : c.72.2.0 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d3hn6b_ : (MET71) (ALA111) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Borrelia burgdorferi [TaxId: 224326]
d3myrc_ : (PRO142) (GLY183) [view usage] : e.19.1.0 |HydA/Nqo6-like |HydA/Nqo6-like |automated matches |automated matches |Allochromatium vinosum [TaxId: 1049]
d2g64a1 : (GLY43) (VAL91) [view usage] : d.96.1.2 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |6-pyruvoyl tetrahydropterin synthase |6-pyruvoyl tetrahydropterin synthase |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1t9ka_ : (GLU27) (TYR68) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Probable methylthioribose-1-phosphate isomerase TM0911 |Thermotoga maritima [TaxId: 2336]
d2fv4a1 : (VAL180) (LEU221) [view usage] : d.300.1.1 |Kinetochore globular domain-like |Kinetochore globular domain |Spc25-like |Kinetochore protein Spc25 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1gmyb_ : (GLU19) (CYS63) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin B |Human (Homo sapiens) [TaxId: 9606]
d1f3ca_ : (LYS9) (ASN51) [view usage] : d.39.1.1 |DLC |DLC |DLC |Dynein light chain 1 (DLC1) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2nqdb_ : (PRO15) (ASP55) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ebla2 : (ASP239) (VAL266) [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Ketoacyl-ACP synthase III (FabH) |Escherichia coli [TaxId: 562]
d3hn6a_ : (MET71) (ALA111) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Borrelia burgdorferi [TaxId: 224326]
d1y15a_ : (ASN159) (SER231) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion protein domain |Mouse (Mus musculus) [TaxId: 10090]
d2l40a_ : (ASN159) (ARG230) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1u0ma2 : (ASP265) (PHE291) [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Putative polyketide synthase SCO1206 |Streptomyces coelicolor [TaxId: 1902]
d1ni7a_ : (LYS76) (GLN110) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |Hypothetical protein YgdK |Escherichia coli [TaxId: 562]
d2kfoa_ : (ASN159) (GLY228) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1pzca_ : (MET86) (ALA122) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Pseudoazurin |Alcaligenes faecalis, strain s-6 [TaxId: 511]
d3f2gb2 : (MET141) (SER176) [view usage] : d.357.1.2 |NosL/MerB-like |NosL/MerB-like |MerB-like |Alkylmercury lyase MerB |Escherichia coli [TaxId: 562]
d3cjsc1 : (ALA6) (THR45) [view usage] : d.47.1.1 |Ribosomal L11/L12e N-terminal domain |Ribosomal L11/L12e N-terminal domain |Ribosomal L11/L12e N-terminal domain |Ribosomal protein L11, N-terminal domain |Thermus thermophilus [TaxId: 274]
d4m9cb_ : (THR2) (ALA34) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d1ldma1 : (ILE132) (ILE159) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Dogfish (Squalus acanthias) [TaxId: 7797]
d3axfa_ : (GLY112) (LEU146) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1un8a4 : (ASN131) (THR186) [view usage] : c.119.1.2 |DAK1/DegV-like |DAK1/DegV-like |DAK1 |Dihydroxyacetone kinase |Citrobacter freundii [TaxId: 546]
d3cr3c_ : (GLU84) (LEU120) [view usage] : c.54.1.2 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |DhaM-like |PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM |Lactococcus lactis [TaxId: 1358]
d3dpca_ : (LEU417) (GLY447) [view usage] : c.76.1.1 |Alkaline phosphatase-like |Alkaline phosphatase-like |Alkaline phosphatase |Alkaline phosphatase |Escherichia coli K-12 [TaxId: 83333]
d3b48c_ : (TYR92) (ALA126) [view usage] : c.54.1.2 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |DhaM-like |Uncharacterized protein EF1359 |Enterococcus faecalis [TaxId: 1351]
d1gtma2 : (GLU138) (THR174) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Pyrococcus furiosus [TaxId: 2261]
d4epka_ : (MET290) (PHE329) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d4ifra_ : (MET290) (PHE329) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d3iprc_ : (LYS90) (GLU128) [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
d2pyua_ : (ALA65) (MET106) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1gv4a3 : (VAL573) (ASN608) [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Apoptosis-inducing factor (AIF) |Mouse (Mus musculus) [TaxId: 10090]
d1m5ya2 : (THR172) (ALA218) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Porin chaperone SurA, PPIase domains |Escherichia coli [TaxId: 562]
d1zcfa_ : (GLY292) (ALA326) [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |automated matches |Pectobacterium atrosepticum [TaxId: 218491]
d4m9cd_ : (THR2) (ALA34) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d1m5yb2 : (LEU176) (ALA218) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Porin chaperone SurA, PPIase domains |Escherichia coli [TaxId: 562]
d1b5tb_ : (VAL205) (PHE239) [view usage] : c.1.23.1 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Methylenetetrahydrofolate reductase |Methylenetetrahydrofolate reductase |Escherichia coli [TaxId: 562]
d1jwqa_ : (THR92) (THR134) [view usage] : c.56.5.6 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase CwlV |Paenibacillus polymyxa [TaxId: 1406]
d3vm7a1 : (ASN143) (SER163) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Malbranchea cinnamomea [TaxId: 5041]
d4a73c1 : (VAL134) (VAL161) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1tq6a_ : (SER68) (MET109) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Interferon-inducible GTPase |Mouse (Mus musculus) [TaxId: 10090]
d4b0na2 : (ASP326) (ALA353) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Ectocarpus siliculosus [TaxId: 2880]
d1p31a3 : (ASN278) (PHE320) [view usage] : c.72.2.1 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |MurCDEF |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
d1euza2 : (THR139) (THR175) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermococcus profundus [TaxId: 49899]
d4m9ca_ : (THR2) (ALA34) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d1ez4b1 : (GLY131) (ILE159) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Lactobacillus pentosus [TaxId: 1589]
d3zqaa_ : (GLY170) (ASN203) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1gqyb3 : (ASN278) (PHE320) [view usage] : c.72.2.1 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |MurCDEF |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
d2daxa1 : (ILE92) (VAL140) [view usage] : d.20.1.3 |UBC-like |UBC-like |RWD domain |Uncharacterized protein C21orf6 |Human (Homo sapiens) [TaxId: 9606]
d1fh0a_ : (PRO15) (ASP55) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin V |Human (Homo sapiens) [TaxId: 9606]
d1yixa1 : (LEU201) (HIS255) [view usage] : c.1.9.12 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |TatD Mg-dependent DNase-like |Putative deoxyribonuclease YcfH |Escherichia coli [TaxId: 562]
d1ukxa_ : (VAL78) (ASN130) [view usage] : d.20.1.3 |UBC-like |UBC-like |RWD domain |EIF2-alpha kinase 4 (GCN2-like protein) |Mouse (Mus musculus) [TaxId: 10090]
d1m5yc2 : (LEU176) (ALA218) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Porin chaperone SurA, PPIase domains |Escherichia coli [TaxId: 562]
d1tlba_ : (THR148) (TYR198) [view usage] : d.248.1.1 |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3iprb_ : (ILE91) (VAL130) [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
d3ipra_ : (LYS90) (VAL130) [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
d3b48f_ : (TYR92) (ALA126) [view usage] : c.54.1.2 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |DhaM-like |Uncharacterized protein EF1359 |Enterococcus faecalis [TaxId: 1351]
d2gzxa_ : (LEU200) (PHE253) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
d2hg6a1 : (TYR28) (ILE46) [view usage] : d.364.1.1 |PA1123-like |PA1123-like |PA1123-like |Hypothetical protein PA1123 |Pseudomonas aeruginosa [TaxId: 287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.81, c.94, c.2, c.76, c.108, c.82, c.56, c.124, c.72, c.37, c.95, d.3, d.248, d.96, b.6, d.20, c.51, d.79, d.87,
c.54, c.88, c.58, e.19, d.26, d.6, c.119, d.224, d.39, d.47, d.300, d.357, d.364