Tableau information
Concept source: d2q5rb_ amino acid (a.a.) range (THR180)(GLN210)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR180) (ASN185) E1
(ASN185) (ASN194) H2
(SER200) (GLN210) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 103.5° H2
H3 140.7° 57.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1k8kd1 : (THR53) (GLY81) [view usage] : d.198.2.1 |Secretion chaperone-like |Arp2/3 complex subunits |Arp2/3 complex subunits |ARPC2 (34 kDa subunit) |Cow (Bos taurus) [TaxId: 9913]
d1edba_ : (SER88) (ASP114) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d1n04a1 : (ALA249) (THR278) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d2xhub_ : (ARG158) (THR181) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d3bgub_ : (GLY2) (ILE34) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Thermobifida fusca [TaxId: 269800]
d1r6ya_ : (MET1) (GLU34) [view usage] : d.58.4.11 |Ferredoxin-like |Dimeric alpha+beta barrel |PA3566-like |Hypothetical protein YgiN |Escherichia coli [TaxId: 562]
d4kija_ : (ILE4) (PRO21) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2ooya_ : (VAL456) (ILE497) [view usage] : d.129.6.2 |TBP-like |KA1-like |Ssp2 C-terminal domain-like |Snf1-like protein kinase ssp2 |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d4wsha_ : (ALA72) (LEU113) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3gvva_ : (GLY105) (GLY132) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d1ddta2 : (GLY87) (THR120) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Diphtheria toxin, N-terminal domain |Corynebacterium diphtheriae [TaxId: 1717]
d2gh1a1 : (SER152) (GLN178) [view usage] : c.66.1.49 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |BC2162-like |Methyltransferase BC2162 |Bacillus cereus [TaxId: 1396]
d2jnja_ : (THR44) (GLN66) [view usage] : d.295.1.1 |TFB5-like |TFB5-like |TFB5-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d1pa_ : (LYS110) (LYS157) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1qs2a1 : (ILE142) (GLN176) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Vegetative insecticidal protein 2 (VIP2) |Bacillus cereus [TaxId: 1396]
d5pnta_ : (LYS110) (LYS155) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens) [TaxId: 9606]
d1wpma_ : (ASN285) (MET307) [view usage] : c.107.1.1 |DHH phosphoesterases |DHH phosphoesterases |Manganese-dependent inorganic pyrophosphatase (family II) |Manganese-dependent inorganic pyrophosphatase (family II) |Bacillus subtilis [TaxId: 1423]
d1j6pa2 : (ALA50) (GLU68) [view usage] : c.1.9.9 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |SAH/MTA deaminase-like |Hypothetical protein TM0936, probable catalytic domain |Thermotoga maritima [TaxId: 2336]
d1wpmb_ : (ASN285) (ALA308) [view usage] : c.107.1.1 |DHH phosphoesterases |DHH phosphoesterases |Manganese-dependent inorganic pyrophosphatase (family II) |Manganese-dependent inorganic pyrophosphatase (family II) |Bacillus subtilis [TaxId: 1423]
d4m75b_ : (ARG68) (GLU89) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2cx7a_ : (LEU101) (VAL129) [view usage] : d.106.1.1 |SCP-like |SCP-like |Sterol carrier protein, SCP |automated matches |Thermus thermophilus [TaxId: 274]
d3u94d_ : (ASP211) (LYS248) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1cfea_ : (GLY52) (ASN79) [view usage] : d.111.1.1 |PR-1-like |PR-1-like |PR-1-like |Pathogenesis-related protein 1 (PR1) |Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]
d1wzza1 : (ASP171) (ALA193) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Probable endoglucanase CmcAX |Acetobacter xylinus [TaxId: 28448]
d2w9ba1 : (GLY162) (ILE186) [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d3hiqa_ : (ASN113) (GLY138) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Common soapwort (Saponaria officinalis) [TaxId: 3572]
d1hqia_ : (ARG45) (ASP62) [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Phenol hydroxylase P2 protein |Pseudomonas sp., CF600 [TaxId: 306]
d1d1pb_ : (LYS110) (LYS157) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1zi7a1 : (ILE33) (ILE59) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2cwpa_ : (THR47) (GLU62) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d2qhfa_ : (LEU308) (ASP391) [view usage] : d.258.1.0 |Chorismate synthase, AroC |Chorismate synthase, AroC |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2p2ra_ : (THR288) (GLY318) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Poly(RC)-binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d1rr6a_ : (THR242) (ILE282) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Human (Homo sapiens) [TaxId: 9606]
d3mcwa_ : (GLY146) (CYS178) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 243365]
d3b9nb_ : (CYS282) (GLY315) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Geobacillus thermodenitrificans [TaxId: 33940]
d2iw4a_ : (ASN285) (MET307) [view usage] : c.107.1.1 |DHH phosphoesterases |DHH phosphoesterases |Manganese-dependent inorganic pyrophosphatase (family II) |Manganese-dependent inorganic pyrophosphatase (family II) |Bacillus subtilis [TaxId: 1423]
d3ljta_ : (SER393) (SER423) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4n6fb_ : (ARG60) (THR79) [view usage] : c.1.31.0 |TIM beta/alpha-barrel |ThiG-like |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 797057]
d2yyea2 : (SER295) (LEU317) [view usage] : d.139.1.1 |PurM C-terminal domain-like |PurM C-terminal domain-like |PurM C-terminal domain-like |Selenide, water dikinase SelD |Aquifex aeolicus [TaxId: 63363]
d3cu7a3 : (ILE296) (ASN320) [view usage] : b.1.29.4 |Immunoglobulin-like beta-sandwich |Macroglobulin |Complement C3 MG3-like |Complement C5 MG3 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.69, c.94, d.58, c.56, a.102, c.66, d.92, d.165, d.129, c.72, c.23, b.40, d.166, c.107, b.1, c.33, d.106, d.139,
d.137, d.111, b.38, c.44, d.51, d.198, d.338, d.258, d.295