Tableau information
Concept source: d3m0ea_ amino acid (a.a.) range (ILE303)(ALA333)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE303) (PRO309) E1
(PRO309) (LYS314) H2
(ILE317) (ALA333) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -77.6° H2
H3 -78.2° -106.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wx5a_ : (THR2) (SER44) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d4byya1 : (GLU101) (ILE145) [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d2gh4a_ : (TYR138) (LYS159) [view usage] : a.102.1.6 |alpha/alpha toroid |Six-hairpin glycosidases |Hypothetical protein YteR |Hypothetical protein YteR |Bacillus subtilis [TaxId: 1423]
d1clca1 : (TYR202) (VAL230) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |CelD cellulase, C-terminal domain |Clostridium thermocellum [TaxId: 1515]
d3e6da1 : (ARG103) (VAL141) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
d2h6bb2 : (ARG103) (THR146) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
d3sc6d_ : (GLY263) (THR281) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
d2cmzc_ : (GLY256) (LEU305) [view usage] : e.76.1.2 |Viral glycoprotein ectodomain-like |Viral glycoprotein ectodomain-like |Spike glycoprotein-like |automated matches |Vesicular stomatitis indiana virus [TaxId: 11277]
d1nxca_ : (HIS406) (TYR439) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Mouse (Mus musculus) [TaxId: 10090]
d1u12a_ : (LEU319) (ARG349) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Putative ion channel CnbD |Mesorhizobium loti [TaxId: 381]
d2yaaa_ : (GLY171) (GLY213) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1kgga_ : (ASP179) (LEU207) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d1u12b_ : (LEU320) (ALA345) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Putative ion channel CnbD |Mesorhizobium loti [TaxId: 381]
d4e89a_ : (LYS628) (ALA663) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Xenotropic mulv-related virus [TaxId: 373193]
d2dvia3 : (TYR411) (GLY434) [view usage] : d.58.16.2 |Ferredoxin-like |PAP/Archaeal CCA-adding enzyme, C-terminal domain |Archaeal tRNA CCA-adding enzyme |tRNA nucleotidyltransferase, C-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d1woka2 : (ASP800) (TYR829) [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3if6b_ : (ASN163) (ILE198) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1w8ia_ : (LEU126) (GLY153) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein AF1683 |Archaeoglobus fulgidus [TaxId: 2234]
d3co2a_ : (SER318) (LEU346) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Mesorhizobium loti [TaxId: 381]
d1dida_ : (GLY188) (ILE210) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Arthrobacter, strain b3728 [TaxId: 1663]
d1ekjc_ : (ILE215) (GLY250) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |beta-carbonic anhydrase |Pea (Pisum sativum) [TaxId: 3888]
d1at1a1 : (GLN6) (VAL43) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d3awta_ : (THR2) (SER44) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d4oeta_ : (GLY76) (GLU105) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2d8na_ : (ASP164) (PHE188) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jazb_ : (GLN345) (PHE363) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor gamma, PPAR-gamma |Human (Homo sapiens) [TaxId: 9606]
d1jx1c_ : (ALA176) (GLU215) [view usage] : d.36.1.1 |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1bwpa_ : (GLY137) (ALA169) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d3e6bb1 : (ARG103) (ASN145) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
d1i2ka_ : (ASP249) (PRO268) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |Aminodeoxychorismate lyase |Escherichia coli [TaxId: 562]
d1xlma_ : (GLY188) (ILE210) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Arthrobacter, strain b3728 [TaxId: 1663]
d2fnca_ : (LEU76) (SER98) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d4xiaa_ : (GLY188) (ILE210) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Arthrobacter, strain b3728 [TaxId: 1663]
d3clpa_ : (LEU320) (ARG349) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Rhizobium loti [TaxId: 381]
d1vp6a_ : (SER318) (ARG348) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Putative ion channel CnbD |Mesorhizobium loti [TaxId: 381]
d1epwa3 : (CYS70) (GLY114) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype B [TaxId: 1491]
d1g82a_ : (HIS186) (LEU205) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibroblast growth factor 9, FGF9 |Human (Homo sapiens) [TaxId: 9606]
d1t77a2 : (GLU2103) (THR2126) [view usage] : b.55.1.6 |PH domain-like barrel |PH domain-like |PreBEACH PH-like domain |Lipopolysaccharide-responsive and beige-like anchor protein LRBA |Human (Homo sapiens) [TaxId: 9606]
d4pe3a_ : (LYS312) (GLY359) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 349101]
d1iupa_ : (ARG249) (ASN271) [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |Meta-cleavage product hydrolase CumD |Pseudomonas fluorescens [TaxId: 294]
d3e6db1 : (ARG102) (VAL140) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
d2jjoa_ : (VAL50) (VAL102) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Saccharopolyspora erythraea [TaxId: 1836]
d3e6ba1 : (ARG103) (MET144) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
d3co2d_ : (SER318) (GLU347) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Mesorhizobium loti [TaxId: 381]
d1mkaa_ : (GLU5) (GLY25) [view usage] : d.38.1.2 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |beta-Hydroxydecanol thiol ester dehydrase |beta-Hydroxydecanol thiol ester dehydrase |Escherichia coli [TaxId: 562]
d1eypa_ : (ALA176) (GLU215) [view usage] : d.36.1.1 |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Alfalfa (Medicago sativa) [TaxId: 3879]
d4gy9a_ : (ASP125) (TYR158) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
d4gtob_ : (TYR147) (VAL171) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1c4xa_ : (ARG260) (PHE281) [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) |Rhodococcus sp., strain rha1 [TaxId: 1831]
d2ci6a_ : (THR13) (LYS33) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d3qkvb_ : (VAL509) (LYS540) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3co2b_ : (SER318) (LEU346) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Mesorhizobium loti [TaxId: 381]
d1prtb2 : (LYS26) (VAL48) [view usage] : d.169.1.2 |C-type lectin-like |C-type lectin-like |Aerolysin/Pertussis toxin (APT) domain |Pertussis toxin, S2/S3 subunits, N-terminal domain |Bordetella pertussis [TaxId: 520]
d4tn1a1 : (VAL710) (TYR744) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Chaetomium thermophilum [TaxId: 209285]
d3dina3 : (GLU579) (LEU606) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Translocation ATPase SecA, nucleotide-binding domains |Thermotoga maritima MSB8 [TaxId: 243274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, b.82, c.69, c.94, a.104, c.2, d.58, c.117, a.102, d.92, d.129, c.23, d.144, c.37, c.55, d.166, a.86, d.169, e.17,
d.126, a.123, c.78, c.53, b.42, d.38, b.55, c.120, a.39, e.76, d.36