Tableau information
Concept source: d3ekrb_ amino acid (a.a.) range (GLU15)(SER63)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU15) (ALA21) E1
(GLN23) (THR36) H2
(TYR38) (SER63) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -82.7° H2
H3 124.3° -137.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ygaa_ : (MET1) (ILE29) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2w43b_ : (ILE2) (GLY37) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d3b7ba_ : (GLU738) (GLY765) [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nzeb_ : (SER204) (SER264) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Arthrobacter aurescens [TaxId: 290340]
d1pn2b1 : (PRO5) (TYR32) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Yeast (Candida tropicalis) [TaxId: 5482]
d1qx6a_ : (THR125) (HIS153) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
d1m7sb_ : (GLY342) (GLN377) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Pseudomonas syringae [TaxId: 317]
d1wbhb_ : (LEU179) (LEU213) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |KDPG aldolase |Escherichia coli [TaxId: 562]
d1kvna_ : (MET1) (GLY20) [view usage] : d.201.1.1 |SRP19 |SRP19 |SRP19 |SRP19 |Archaeoglobus fulgidus [TaxId: 2234]
d3op1b1 : (GLU91) (THR113) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3re8a_ : (GLY341) (CYS376) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Cow (Bos taurus) [TaxId: 9913]
d2nn6b1 : (LEU70) (ASP92) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease RRP41 |Human (Homo sapiens) [TaxId: 9606]
d3k98b_ : (GLU15) (SER63) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Human (Homo sapiens) [TaxId: 9606]
d3k99b_ : (GLU16) (ILE43) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Human (Homo sapiens) [TaxId: 9606]
d1rqxc_ : (VAL257) (GLY287) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |1-aminocyclopropane-1-carboxylate deaminase |Pseudomonas sp., strain ACP [TaxId: 306]
d3ntla_ : (PRO195) (LYS240) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |automated matches |Enterobacter cloacae [TaxId: 550]
d3ekrb_ : (GLU15) (SER63) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Human (Homo sapiens) [TaxId: 9606]
d4arxa2 : (ARG265) (SER290) [view usage] : b.77.2.0 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |automated matches |automated matches |Bacillus thuringiensis [TaxId: 29339]
d1pn4a1 : (PRO5) (TYR32) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Yeast (Candida tropicalis) [TaxId: 5482]
d1t3na2 : (VAL29) (LYS53) [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase iota |Human (Homo sapiens) [TaxId: 9606]
d1m7sa_ : (GLY342) (GLN377) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Pseudomonas syringae [TaxId: 317]
d1j0ca_ : (PHE258) (GLU287) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |1-aminocyclopropane-1-carboxylate deaminase |Yeast (Hansenula saturnus) [TaxId: 4906]
d1pn4d1 : (PRO5) (TYR32) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Yeast (Candida tropicalis) [TaxId: 5482]
d2wcwd_ : (PHE107) (GLY125) [view usage] : c.52.1.0 |Restriction endonuclease-like |Restriction endonuclease-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1djqa1 : (ASP316) (GLY337) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Trimethylamine dehydrogenase, N-terminal domain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d1g10a_ : (GLU55) (ASN79) [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Toluene-4-monooxygenase catalytic effector protein |Pseudomonas mendocina [TaxId: 300]
d1mxsa_ : (MET191) (LEU222) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |KDPG aldolase |Pseudomonas putida [TaxId: 303]
d1yc3a_ : (GLU16) (LEU64) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Human (Homo sapiens) [TaxId: 9606]
d1pn2a1 : (PRO5) (TYR32) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Yeast (Candida tropicalis) [TaxId: 5482]
d1lnqa4 : (VAL265) (VAL288) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Potassium channel-related protein MthK, C-terminal domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d1fzda_ : (ASN763) (GLU817) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), fibrinogen-420, alpha-E [TaxId: 9606]
d3bq1a2 : (ILE2) (LYS26) [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus acidocaldarius [TaxId: 2285]
d1a4ha_ : (MET1) (ILE29) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2wcza_ : (ASN106) (LYS126) [view usage] : c.52.1.0 |Restriction endonuclease-like |Restriction endonuclease-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1vffa1 : (GLU389) (ARG415) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Pyrococcus horikoshii [TaxId: 53953]
d1gt8a3 : (GLY302) (ALA323) [view usage] : c.3.1.1 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |C-terminal domain of adrenodoxin reductase-like |Dihydropyrimidine dehydrogenase, domain 3 |Pig (Sus scrofa) [TaxId: 9823]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, e.5, c.1, c.108, c.79, c.26, c.124, d.122, d.171, d.14, c.60, d.211, d.38, b.77, c.52, c.3, d.137, b.100, d.286, d.201