Tableau information
Concept source: d1ht6a2 amino acid (a.a.) range (ILE319)(GLY347)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE319) (PHE323) E1
(PHE323) (PHE328) H2
(PHE332) (GLY347) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -65.1° H2
H3 -168.6° -109.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1k83e1 : (PHE60) (GLY76) [view usage] : c.52.3.1 |Restriction endonuclease-like |Eukaryotic RPB5 N-terminal domain |Eukaryotic RPB5 N-terminal domain |Eukaryotic RPB5 N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1pz3a2 : (TYR24) (GLN64) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alpha-L-arabinofuranosidase, catalytic domain |Bacillus stearothermophilus [TaxId: 1422]
d2c7fa2 : (TYR22) (ASN62) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alpha-L-arabinofuranosidase, catalytic domain |Clostridium thermocellum [TaxId: 1515]
d1cgwa4 : (ASN263) (VAL292) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
d3mpda_ : (MET1) (GLY29) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
d1ry9a_ : (GLN99) (LEU133) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |Surface presentation of antigens protein SpaK (Spa15) |Shigella flexneri [TaxId: 623]
d2ia5h1 : (LYS160) (GLY204) [view usage] : c.108.1.9 |HAD-like |HAD-like |phosphatase domain of polynucleotide kinase |Polynucleotide kinase, phosphatase domain |Bacteriophage T4 [TaxId: 10665]
d1zbra1 : (VAL16) (GLU49) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Porphyromonas gingivalis [TaxId: 837]
d4bp0a_ : (LYS210) (ASP250) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1mv5d_ : (LYS3547) (THR3581) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Multidrug resistance ABC transporter LmrA, C-terminal domain |Lactococcus lactis [TaxId: 1358]
d1uoka2 : (ASN102) (TYR126) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Oligo-1,6, glucosidase |Bacillus cereus [TaxId: 1396]
d2bsqa1 : (MET1) (SER27) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Trafficking protein B |Neisseria gonorrhoeae [TaxId: 485]
d1v96b_ : (PRO5) (PHE33) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PH0500 |Pyrococcus horikoshii [TaxId: 53953]
d2d62a1 : (ASP211) (ILE243) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d3tvuc1 : (TYR1655) (LEU1676) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2ogxa_ : (TRP40) (LEU68) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Azotobacter vinelandii [TaxId: 354]
d1qrqa_ : (CYS51) (GLY80) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Voltage-dependent K+ channel beta subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4bi6a_ : (ASP232) (LYS254) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Giardia intestinalis [TaxId: 5741]
d4blva_ : (GLY46) (GLN71) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2od0a1 : (LYS77) (LEU105) [view usage] : d.198.5.2 |Secretion chaperone-like |YgaC/TfoX-N like |TfoX N-terminal domain-like |Hypothetical protein VP1028 |Vibrio parahaemolyticus [TaxId: 670]
d1ht6a2 : (ILE319) (GLY347) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Plant alpha-amylase |Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
d3tefa_ : (HIS300) (SER329) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
d1jqdb_ : (GLU216) (THR245) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1ly7a_ : (ASN172) (LYS208) [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |C-terminal domain of frataxin |Human (Homo sapiens) [TaxId: 9606]
d2od0b_ : (LYS77) (LYS104) [view usage] : d.198.5.2 |Secretion chaperone-like |YgaC/TfoX-N like |TfoX N-terminal domain-like |Hypothetical protein VP1028 |Vibrio parahaemolyticus [TaxId: 670]
d2gbsa1 : (LYS93) (MET110) [view usage] : b.122.1.8 |PUA domain-like |PUA domain-like |Atu2648/PH1033-like |Hypothetical protein RPA0253 |Rhodopseudomonas palustris [TaxId: 1076]
d1g2912 : (ASP208) (ILE240) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Maltose transport protein MalK, N-terminal domain |Thermococcus litoralis [TaxId: 2265]
d3tz3c1 : (TYR1655) (LEU1676) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2h1ca1 : (MET1) (SER27) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Trafficking protein B |Neisseria gonorrhoeae [TaxId: 485]
d3bsha1 : (ILE319) (GLY347) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
d1k0fa_ : (GLY274) (LEU306) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Periplasmic zinc binding protein TroA |Treponema pallidum [TaxId: 160]
d4m81a_ : (ASN247) (TRP277) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d3b4ub_ : (GLY205) (GLY228) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d1s2ja_ : (ASP144) (TRP170) [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |Peptidoglycan-recognition protein-SA (Cg11709) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1ud2a2 : (TYR358) (ARG388) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus sp., ksm-k38 [TaxId: 1409]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.58, c.108, c.92, d.157, c.66, c.14, c.37, b.122, d.126, c.73, c.120, d.118, c.52, d.82, d.198