Tableau information
Concept source: d1ga2a1 amino acid (a.a.) range (VAL366)(GLU420)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL366) (HIS371) E1
(GLN384) (THR389) H2
(ASN415) (GLU420) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -139.9° H2
H3 -134.4° 64.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4awzc_ : (ILE258) (THR311) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1xcba2 : (SER104) (ILE141) [view usage] : c.2.1.12 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Transcriptional repressor Rex, C-terminal domain |Transcriptional repressor Rex, C-terminal domain |Thermus aquaticus [TaxId: 271]
d1yoba1 : (ILE3) (GLN46) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Azotobacter vinelandii [TaxId: 354]
d3m2la_ : (ASN172) (GLY223) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |Alpha-hemolysin |Staphylococcus aureus [TaxId: 1280]
d4knsa2 : (ASP154) (PRO193) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Nitrosomonas europaea [TaxId: 228410]
d2rb5a_ : (ASN111) (LYS145) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Sugar-phosphate phosphatase BT4131 |Bacteroides thetaiotaomicron [TaxId: 818]
d1p4rb1 : (LEU29) (HIS69) [view usage] : c.24.1.3 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Inosicase |IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC |Human (Homo sapiens) [TaxId: 9606]
d2zcid1 : (LYS142) (GLY172) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d2acvb_ : (LEU374) (ASP424) [view usage] : c.87.1.10 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDPGT-like |Triterpene UDP-glucosyl transferase UGT71G1 |Medicago truncatula [TaxId: 3880]
d1pj4a2 : (VAL205) (TYR246) [view usage] : c.58.1.3 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Malic enzyme N-domain |Mitochondrial NAD(P)-dependent malic enzyme |Human (Homo sapiens) [TaxId: 9606]
d1f6mc_ : (GLY21) (LEU53) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
d2xy8a_ : (ASN46) (ALA83) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d2wc1a_ : (LYS3) (ALA47) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d3pc7a_ : (ARG855) (ALA888) [view usage] : c.15.1.2 |BRCT domain |BRCT domain |DNA ligase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c3pa_ : (GLU249) (VAL285) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |HDAC homologue |Aquifex aeolicus [TaxId: 63363]
d3m4da_ : (ASN172) (GLY223) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |Alpha-hemolysin |Staphylococcus aureus [TaxId: 1280]
d1gxld_ : (GLY578) (LEU613) [view usage] : d.215.1.1 |Smc hinge domain |Smc hinge domain |Smc hinge domain |Smc hinge domain |Thermotoga maritima [TaxId: 2336]
d4pxha_ : (PHE53) (GLY86) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces sp. [TaxId: 1001349]
d3r77b_ : (GLN169) (VAL206) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Phenazine biosynthesis protein PhzD |Pseudomonas fluorescens [TaxId: 294]
d2zcia1 : (PRO141) (GLY172) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1h1la_ : (ASP417) (ASN467) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Klebsiella pneumoniae [TaxId: 573]
d1poib_ : (ASP48) (LYS98) [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |Glutaconate:CoA transferase beta |Acidaminococcus fermentans [TaxId: 905]
d2rara_ : (ASN111) (LYS145) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Sugar-phosphate phosphatase BT4131 |Bacteroides thetaiotaomicron [TaxId: 818]
d1g7ua_ : (ALA234) (PHE277) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Escherichia coli [TaxId: 562]
d3cq5a_ : (GLY192) (TYR216) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Corynebacterium glutamicum
d2acva_ : (LEU374) (ASP424) [view usage] : c.87.1.10 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDPGT-like |Triterpene UDP-glucosyl transferase UGT71G1 |Medicago truncatula [TaxId: 3880]
d1ii2a2 : (LYS48) (THR87) [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Trypanosoma cruzi [TaxId: 5693]
d3w9va_ : (PRO134) (LEU182) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Unidentified prokaryotic [TaxId: 2725]
d1ymqa1 : (ASN111) (ASN144) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Sugar-phosphate phosphatase BT4131 |Bacteroides thetaiotaomicron [TaxId: 818]
d4pwva_ : (PHE53) (GLY86) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces sp. [TaxId: 1001349]
d3ifwa_ : (CYS47) (GLN103) [view usage] : d.3.1.6 |Cysteine proteinases |Cysteine proteinases |Ubiquitin carboxyl-terminal hydrolase UCH-L |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kbva2 : (ASP164) (ALA215) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Neisseria gonorrhoeae, AniA [TaxId: 485]
d1gq2a2 : (VAL205) (GLY247) [view usage] : c.58.1.3 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Malic enzyme N-domain |Mitochondrial NAD(P)-dependent malic enzyme |Domestic pigeon (Columba livia) [TaxId: 8932]
d2qe7d2 : (ASP319) (PRO349) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |automated matches |Bacillus sp. [TaxId: 90973]
d3weca_ : (ALA46) (GLY82) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodococcus erythropolis [TaxId: 1833]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.94, a.104, c.2, c.108, c.92, d.157, a.102, c.124, c.42, c.23, c.37, c.47, c.55, d.3, c.87, b.6, c.109, c.33,
c.24, c.58, c.15, f.6, d.215