Tableau information
Concept source: d1uuya_ amino acid (a.a.) range (LYS7)(SER37)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS7) (THR12) E1
(SER14) (GLY20) H2
(SER26) (SER37) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 94.4° H2
H3 156.9° -101.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1l2wd_ : (HIS86) (GLN118) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |YopE chaperone SycE |Yersinia pestis [TaxId: 632]
d4twge_ : (ARG5) (GLY37) [view usage] : c.57.1.0 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |automated matches |automated matches |Mycobacterium ulcerans [TaxId: 362242]
d1u0ka2 : (GLY161) (GLY191) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Hypothetical protein PA4716 |Pseudomonas aeruginosa [TaxId: 287]
d1fcua_ : (GLU10) (GLY37) [view usage] : c.1.8.9 |TIM beta/alpha-barrel |(Trans)glycosidases |Bee venom hyaluronidase |Bee venom hyaluronidase |Honeybee (Apis mellifera) [TaxId: 7460]
d1jnra3 : (HIS259) (ARG296) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Adenylylsulfate reductase A subunit |Archaeoglobus fulgidus [TaxId: 2234]
d4twgd_ : (SER2) (GLY37) [view usage] : c.57.1.0 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |automated matches |automated matches |Mycobacterium ulcerans [TaxId: 362242]
d2ie8a_ : (ALA137) (LYS180) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Thermus caldophilus [TaxId: 272]
d1v6sa_ : (GLU136) (LYS180) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Thermus thermophilus [TaxId: 274]
d1rpaa_ : (LYS4) (ARG56) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1l2wf_ : (HIS86) (LEU117) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |YopE chaperone SycE |Yersinia pestis [TaxId: 632]
d2cyxa_ : (GLY86) (ALA128) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p9qa2 : (GLY717) (ILE751) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1qhoa4 : (THR356) (ASN401) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
d4h17b_ : (ALA156) (ILE196) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d2bruc_ : (GLN142) (LEU186) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |automated matches |Escherichia coli [TaxId: 562]
d1r61a_ : (THR48) (GLY73) [view usage] : c.8.8.1 |The "swivelling" beta/beta/alpha domain |Putative cyclase |Putative cyclase |Unnamed protein |Bacillus stearothermophilus [TaxId: 1422]
d2ge5a_ : (ASN188) (TYR219) [view usage] : c.52.1.2 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRV |Restriction endonuclease EcoRV |Escherichia coli [TaxId: 562]
d4twgb_ : (ARG5) (GLY37) [view usage] : c.57.1.0 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |automated matches |automated matches |Mycobacterium ulcerans [TaxId: 362242]
d3c1nb1 : (GLU146) (GLY185) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d3m85g1 : (VAL132) (ASP171) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease 2,ECX2 |Archaeoglobus fulgidus [TaxId: 2234]
d3qusa_ : (THR266) (LEU294) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d1weea_ : (GLY38) (LEU66) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |PHD finger protein At1g33420 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2avfd2 : (LYS174) (THR228) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Achromobacter cycloclastes [TaxId: 223]
d3pdia_ : (ALA117) (GLY145) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Azotobacter vinelandii [TaxId: 322710]
d4twgc_ : (ARG5) (ARG36) [view usage] : c.57.1.0 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |automated matches |automated matches |Mycobacterium ulcerans [TaxId: 362242]
d3pbsa1 : (ARG152) (PHE182) [view usage] : d.175.1.0 |Penicillin binding protein dimerisation domain |Penicillin binding protein dimerisation domain |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1l0ba1 : (GLY1656) (GLN1702) [view usage] : c.15.1.3 |BRCT domain |BRCT domain |BRCT domain |Breast cancer associated protein, BRCA1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1vi2a2 : (TYR7) (GLY34) [view usage] : c.58.1.5 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Shikimate dehydrogenase-like |Putative shikimate dehydrogenase YdiB |Escherichia coli [TaxId: 562]
d2x7va_ : (ALA174) (SER204) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1mzpa_ : (LYS82) (ARG105) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Sulfolobus acidocaldarius [TaxId: 2285]
d2jqna_ : (THR2) (GLY32) [view usage] : d.166.1.7 |ADP-ribosylation |ADP-ribosylation |CC0527-like |Hypothetical protein CC0527 |Caulobacter crescentus [TaxId: 155892]
d4twga_ : (ARG5) (GLY37) [view usage] : c.57.1.0 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |automated matches |automated matches |Mycobacterium ulcerans [TaxId: 362242]
d3ranb_ : (ASN143) (THR206) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Dog (Canis familiaris) [TaxId: 9615]
d1l2wa_ : (HIS86) (THR119) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |YopE chaperone SycE |Yersinia pestis [TaxId: 632]
d2wnhb_ : (ASP13) (LYS67) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d4a17d_ : (GLY121) (GLU168) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, i.1, c.92, c.23, c.37, d.166, c.86, d.14, c.60, c.31, b.6, c.57, d.20, c.73, c.8, d.21, c.33, c.52, d.168, c.58,
d.175, e.24, c.15, d.198, g.50