Tableau information
Concept source: d1g2oa_ amino acid (a.a.) range (ARG81)(GLY111)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG81) (GLY87) E1
(LEU97) (HIS102) H2
(PRO103) (GLY111) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 139.1° H2
H3 172.9° -40.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3l0gd1 : (LEU81) (GLY107) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d4ecib1 : (VAL0) (MET22) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 388272]
d3pt6a5 : (GLU1221) (TYR1260) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |Methyltransferase domain from DNA methyltransferase 1 (DNMT1) |Mouse (Mus musculus) [TaxId: 10090]
d1tika_ : (LYS5) (HIS35) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |ACP phosphodiesterase AcpD |Escherichia coli [TaxId: 562]
d1xk9a_ : (PHE511) (LEU530) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1x53a1 : (GLY100) (GLY136) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1 |Human (Homo sapiens) [TaxId: 9606]
d2aj2a1 : (TRP160) (GLY187) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypothetical protein VC0467 |Vibrio cholerae [TaxId: 666]
d3nbub_ : (ASN259) (LEU279) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |automated matches |Escherichia coli [TaxId: 668369]
d2d5ia_ : (SER1) (LYS31) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |ACP phosphodiesterase AcpD |Escherichia coli [TaxId: 562]
d2c00a1 : (ASP46) (THR73) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d4bi6a_ : (ILE209) (CYS228) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Giardia intestinalis [TaxId: 5741]
d3l0ga1 : (LEU81) (GLY107) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d3l0gc1 : (LEU81) (GLY107) [view usage] : d.41.2.0 |alpha/beta-Hammerhead |Nicotinate/Quinolinate PRTase N-terminal domain-like |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d3pt6b5 : (GLU1221) (TYR1260) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |Methyltransferase domain from DNA methyltransferase 1 (DNMT1) |Mouse (Mus musculus) [TaxId: 10090]
d4esoa_ : (GLY130) (GLU168) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2hafa1 : (TRP162) (GLY189) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypothetical protein VC0467 |Vibrio cholerae [TaxId: 666]
d1bwpa_ : (ALA169) (LEU215) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d2z6aa_ : (ASP73) (GLU110) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |DNA methylase HhaI |Haemophilus parahaemolyticus [TaxId: 735]
d1nd6b_ : (LYS1003) (LYS1054) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Human (Homo sapiens) [TaxId: 9606]
d1kp9a_ : (THR168) (GLY202) [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA1 |Mycobacterium tuberculosis [TaxId: 1773]
d2d37a_ : (PRO43) (SER62) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1bwqa_ : (ALA169) (LEU215) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d3orse_ : (ALA0) (GLU27) [view usage] : c.23.8.0 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |automated matches |automated matches |Staphylococcus aureus [TaxId: 426430]
d4bgea_ : (ARG9) (GLY33) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
d1sqia1 : (SER21) (GLY41) [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |4-hydroxyphenylpyruvate dioxygenase, HppD |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1rcua_ : (LYS2) (GLY36) [view usage] : c.129.1.1 |MCP/YpsA-like |MCP/YpsA-like |MoCo carrier protein-like |Hypothetical protein TM1055 |Thermotoga maritima [TaxId: 2336]
d1qpna1 : (VAL243) (THR262) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
d3hi6a_ : (ILE255) (PHE277) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vi6c_ : (ASP154) (ARG182) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d3bsfa_ : (PRO203) (SER247) [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3ezsb_ : (ASP347) (ASN373) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d1vgya2 : (GLY181) (ALA210) [view usage] : d.58.19.1 |Ferredoxin-like |Bacterial exopeptidase dimerisation domain |Bacterial exopeptidase dimerisation domain |Succinyl-diaminopimelate desuccinylase |Neisseria meningitidis [TaxId: 487]
d1zczb1 : (MET1) (GLY25) [view usage] : c.24.1.3 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Inosicase |IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC |Thermotoga maritima [TaxId: 2336]
d2csua3 : (MSE371) (GLU399) [view usage] : c.23.4.1 |Flavodoxin-like |Succinyl-CoA synthetase domains |Succinyl-CoA synthetase domains |Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 |Pyrococcus horikoshii [TaxId: 53953]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.2, d.58, c.56, c.66, c.80, d.129, c.23, c.47, d.166, c.60, c.62, d.32, b.45, c.24, d.41, c.129, c.30, d.310