Tableau information
Concept source: d4i5xa_ amino acid (a.a.) range (THR206)(LYS242)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR206) (SER211) E1
(SER227) (ASP231) H2
(ASP231) (LYS242) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -97.2° H2
H3 -110.4° -49.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mwoa2 : (PHE162) (SER182) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pyrococcus woesei [TaxId: 2262]
d2c4na1 : (VAL67) (GLY103) [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |NagD |Escherichia coli [TaxId: 562]
d2p4va1 : (MET1) (LEU39) [view usage] : a.2.1.0 |Long alpha-hairpin |GreA transcript cleavage protein, N-terminal domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1clca1 : (ASP543) (VAL572) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |CelD cellulase, C-terminal domain |Clostridium thermocellum [TaxId: 1515]
d1us7a_ : (GLY170) (GLU187) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4fioc_ : (VAL166) (LYS199) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d1mmla_ : (PRO58) (GLY85) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |MMLV reverse transcriptase |Moloney murine leukemia virus, MoMLV [TaxId: 11801]
d2wk4a_ : (ARG182) (THR210) [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Sapporo virus [TaxId: 95342]
d1fbsa_ : (ILE223) (LYS241) [view usage] : a.4.5.22 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Heat-shock transcription factor |Heat-shock transcription factor |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
d4lacb_ : (ILE25) (LYS60) [view usage] : a.268.1.1 |PTPA-like |PTPA-like |PTPA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nxca_ : (HIS471) (ALA491) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Mouse (Mus musculus) [TaxId: 10090]
d1xmma1 : (ASP147) (SER168) [view usage] : d.13.1.3 |HIT-like |HIT-like |mRNA decapping enzyme DcpS C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t6la1 : (THR12) (LEU34) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |UL44 |Human cytomegalovirus, HHV-5 [TaxId: 10359]
d1lvga_ : (ASP166) (GLN193) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Guanylate kinase |Mouse (Mus musculus) [TaxId: 10090]
d1yr0a1 : (SER4) (VAL27) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Phosphinothricin acetyltransferase |Agrobacterium tumefaciens [TaxId: 358]
d4fiob_ : (VAL166) (LYS199) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d1ulid_ : (HIS80) (ALA106) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Biphenyl dioxygenase small subunit BphA2 |Rhodococcus sp. RHA1 [TaxId: 101510]
d1st0a1 : (ARG149) (SER170) [view usage] : d.13.1.3 |HIT-like |HIT-like |mRNA decapping enzyme DcpS C-terminal domain |mRNA decapping enzyme DcpS C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2hv6a1 : (ILE25) (VAL59) [view usage] : a.268.1.1 |PTPA-like |PTPA-like |PTPA-like |Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA |Human (Homo sapiens) [TaxId: 9606]
d1svla_ : (LYS543) (ARG567) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Papillomavirus large T antigen helicase domain |Simian virus 40 [TaxId: 10633]
d2ixma1 : (PRO26) (VAL59) [view usage] : a.268.1.1 |PTPA-like |PTPA-like |PTPA-like |Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA |Human (Homo sapiens) [TaxId: 9606]
d4evyb_ : (MET1) (LEU21) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Acinetobacter haemolyticus [TaxId: 29430]
d1oa0a_ : (GLY363) (GLY388) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d1pw5a_ : (ALA69) (GLY106) [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |Hypothetical protein TM1742 |Thermotoga maritima [TaxId: 2336]
d1lkna_ : (MET1) (PRO22) [view usage] : b.82.1.8 |Double-stranded beta-helix |RmlC-like cupins |Hypothetical protein TM1112 |Hypothetical protein TM1112 |Thermotoga maritima [TaxId: 2336]
d1gpma2 : (GLN179) (GLN203) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GMP synthetase |Escherichia coli [TaxId: 562]
d1st0b1 : (ASP147) (GLN169) [view usage] : d.13.1.3 |HIT-like |HIT-like |mRNA decapping enzyme DcpS C-terminal domain |mRNA decapping enzyme DcpS C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2j8ma_ : (SER2) (GLY25) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein PA4866 |Pseudomonas aeruginosa [TaxId: 287]
d4exlc_ : (MET237) (LYS268) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 637987]
d1xmmd1 : (GLN146) (GLN169) [view usage] : d.13.1.3 |HIT-like |HIT-like |mRNA decapping enzyme DcpS C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wk4b_ : (ARG182) (THR210) [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Sapporo virus [TaxId: 95342]
d2hgj71 : (GLY45) (PRO63) [view usage] : d.301.1.1 |L35p-like |L35p-like |Ribosomal protein L35p |Ribosomal protein L35p |Thermus thermophilus [TaxId: 274]
d4fioa_ : (VAL166) (LYS199) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d4exlb_ : (MET237) (LYS268) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 637987]
d2nefa_ : (VAL180) (HIS199) [view usage] : d.102.1.1 |Regulatory factor Nef |Regulatory factor Nef |Regulatory factor Nef |Regulatory factor Nef |Human immunodeficiency virus type 1 [TaxId: 11676]
d4gvfa_ : (THR179) (ASN204) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d1yypa1 : (THR12) (LEU34) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |UL44 |Human cytomegalovirus, HHV-5 [TaxId: 10359]
d2b24b_ : (HIS573) (PRO599) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |automated matches |Rhodococcus sp. [TaxId: 92694]
d1seva2 : (GLY326) (ARG355) [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Citrullus lanatus [TaxId: 3654]
d2j0181 : (GLY45) (TYR64) [view usage] : d.301.1.1 |L35p-like |L35p-like |Ribosomal protein L35p |Ribosomal protein L35p |Thermus thermophilus [TaxId: 274]
d1ulib_ : (HIS80) (ALA106) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Biphenyl dioxygenase small subunit BphA2 |Rhodococcus sp. RHA1 [TaxId: 101510]
d3pdia_ : (GLU422) (VAL450) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Azotobacter vinelandii [TaxId: 322710]
d4exld_ : (MET237) (LYS268) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 637987]
d2g39a2 : (LYS331) (LEU349) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Acetyl-CoA hydrolase (PA5445) |Pseudomonas aeruginosa [TaxId: 287]
d1ufhb_ : (ILE3) (GLY32) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Putative acetyltransferase YycN |Bacillus subtilis [TaxId: 1423]
d1e1da_ : (GLY370) (GLY395) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio vulgaris [TaxId: 881]
d1wk4a_ : (VAL1) (VAL17) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Probable acetyltransferase TTHA1209 |Thermus thermophilus [TaxId: 274]
d1zxib2 : (GLY268) (LEU291) [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |automated matches |Oligotropha carboxidovorans [TaxId: 504832]
d1fuwa_ : (GLU2) (GLY27) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d2uuta_ : (ARG182) (THR210) [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Sapporo virus [TaxId: 95342]
d1n5wb2 : (GLY268) (LEU291) [view usage] : d.133.1.1 |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Molybdenum cofactor-binding domain |Carbon monoxide (CO) dehydrogenase molybdoprotein |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
d1vlrb1 : (ASP146) (GLN168) [view usage] : d.13.1.3 |HIT-like |HIT-like |mRNA decapping enzyme DcpS C-terminal domain |mRNA decapping enzyme DcpS C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1gnla_ : (GLY363) (GLY388) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d1gnta_ : (GLY370) (GLY395) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio vulgaris [TaxId: 881]
d2zyka_ : (GLU318) (ASN334) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d1hu9a2 : (LYS13) (ILE35) [view usage] : b.12.1.1 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipoxigenase N-terminal domain |Plant lipoxigenase |Soybean (Glycine max), isozyme L3 [TaxId: 3847]
d2y1pa_ : (GLY170) (LEU202) [view usage] : d.61.1.3 |LigT-like |LigT-like |2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1wdwb_ : (GLU318) (GLY339) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Pyrococcus furiosus [TaxId: 2261]
d4nf0f_ : (ARG291) (GLU315) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d4lata_ : (MET237) (LYS268) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d4mdha2 : (LEU302) (SER331) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
d1u2ja_ : (PRO554) (GLU573) [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, b.82, c.94, c.108, c.79, c.92, a.102, c.124, a.93, d.122, c.23, c.37, d.108, d.133, d.17, d.131, a.4, d.162, e.26,
d.13, b.12, a.2, a.268, d.102, d.61, d.147, d.301