Tableau information
Concept source: d1hynr_ amino acid (a.a.) range (ARG263)(MET300)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG263) (LEU269) E1
(ASP277) (GLU291) H2
(ARG292) (MET300) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 158.6° H2
H3 100.0° -79.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fy7a_ : (ALA303) (HIS364) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase ESA1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1t2lb_ : (ALA109) (LYS131) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Coactosin-like protein Cotl1 (Clp) |Human (Homo sapiens) [TaxId: 9606]
d1ptma_ : (ALA163) (HIS190) [view usage] : c.77.1.3 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |PdxA-like |4-hydroxythreonine-4-phosphate dehydrogenase PdxA |Escherichia coli [TaxId: 562]
d1y0ea_ : (GLU89) (VAL119) [view usage] : c.1.2.5 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |NanE-like |Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE |Staphylococcus aureus [TaxId: 1280]
d3irta_ : (VAL79) (THR121) [view usage] : d.3.1.6 |Cysteine proteinases |Cysteine proteinases |Ubiquitin carboxyl-terminal hydrolase UCH-L |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3e7ga_ : (GLY275) (GLY294) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1h54b1 : (SER308) (ILE371) [view usage] : a.102.1.4 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyltransferase family 36 C-terminal domain |Lactobacillus maltose phosphorylase, central domain |Lactobacillus brevis [TaxId: 1580]
d2ghia_ : (GLU221) (GLY256) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Plasmodium yoelii [TaxId: 352914]
d1y15a_ : (PRO137) (TYR157) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion protein domain |Mouse (Mus musculus) [TaxId: 10090]
d2djja1 : (PRO96) (LYS119) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Fungus (Humicola insolens) [TaxId: 34413]
d2iy5b2 : (ARG443) (GLY468) [view usage] : a.6.1.1 |Putative DNA-binding domain |Putative DNA-binding domain |Domains B1 and B5 of PheRS-beta, PheT |Domains B1 and B5 of PheRS-beta, PheT |Thermus thermophilus [TaxId: 274]
d3deba_ : (THR308) (TYR330) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d1yxya1 : (GLY211) (LYS233) [view usage] : c.1.2.5 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |NanE-like |Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE |Streptococcus pyogenes [TaxId: 1314]
d4phtx1 : (THR65) (LEU85) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
d1poxa1 : (GLY284) (ARG300) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d1uuta_ : (GLN163) (GLN195) [view usage] : d.89.1.3 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |Replication protein Rep, nuclease domain |Replication protein Rep, nuclease domain |Adeno-associated virus, aav-5 [TaxId: 272636]
d2fhra1 : (VAL606) (GLY629) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Trypanosoma rangeli [TaxId: 5698]
d1ji0a_ : (TYR207) (GLY237) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Branched chain aminoacid ABC transporter |Thermotoga maritima, TM1139 [TaxId: 2336]
d1nsia_ : (GLY275) (GLY294) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Human (Homo sapiens) [TaxId: 9606]
d2xd2a_ : (GLY296) (ASN341) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1qztb_ : (ALA238) (ALA258) [view usage] : c.77.1.5 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Phosphotransacetylase |Phosphotransacetylase Pta |Methanosarcina thermophila [TaxId: 2210]
d2hyda1 : (LYS544) (LEU578) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Putative multidrug export ATP-binding/permease protein SAV1866 |Staphylococcus aureus [TaxId: 1280]
d4uttc_ : (TYR198) (LEU220) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Clostridium perfringens [TaxId: 195102]
d4k8oa_ : (HIS687) (GLU718) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1dp4a_ : (LEU3) (PRO42) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3szya_ : (ARG147) (GLY165) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1t34a_ : (LEU3) (PRO42) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3t02a_ : (ARG147) (GLY165) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1mr5a1 : (VAL605) (GLY628) [view usage] : b.29.1.15 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Trypanosoma sialidase, C-terminal domain |Trypanosoma sialidase, C-terminal domain |Trypanosoma cruzi [TaxId: 5693]
d2agsa1 : (VAL606) (GLY629) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Trypanosoma rangeli [TaxId: 5698]
d4m4da1 : (ASP165) (SER207) [view usage] : d.83.1.0 |Aha1/BPI domain-like |Bactericidal permeability-increasing protein, BPI |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2ghwc_ : (SER380) (ASN409) [view usage] : d.318.1.1 |SARS receptor-binding domain-like |SARS receptor-binding domain-like |SARS receptor-binding domain-like |Spike protein S1 |SARS coronavirus [TaxId: 227859]
d2ihwa_ : (LEU293) (ILE331) [view usage] : c.43.1.0 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d2ghbb_ : (GLY256) (ASP301) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2zl1a_ : (VAL32) (THR52) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Human (Homo sapiens) [TaxId: 9606]
d3g3ia_ : (ASP213) (ARG253) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1qfja2 : (ASP196) (ILE232) [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |NAD(P)H:flavin oxidoreductase |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, c.76, b.29, a.102, d.92, c.77, c.93, c.37, c.47, c.55, d.3, d.174, c.31, d.108, d.110, c.43, c.25, d.109, d.89,
d.6, d.112, a.6, d.83, d.318