Tableau information
Concept source: d1q98a_ amino acid (a.a.) range (ASN75)(ILE98)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN75) (CYS80) E1
(LEU85) (PHE92) H2
(PHE92) (ILE98) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 116.2° H2
H3 -149.9° -74.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ozlb1 : (LYS22) (TYR47) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |E1-beta subunit of pyruvate dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d1rhca_ : (MET222) (PRO252) [view usage] : c.1.16.3 |TIM beta/alpha-barrel |Bacterial luciferase-like |F420 dependent oxidoreductases |Coenzyme F420 dependent secondary alcohol dehydrogenase |Methanoculleus thermophilicus [TaxId: 2200]
d1atza_ : (VAL1085) (LEU1108) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d1hkha_ : (GLN24) (GLY50) [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |Gamma-lactamase |Aureobacterium sp. [TaxId: 51671]
d2hc1a_ : (THR1679) (LYS1711) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xzpa2 : (ARG213) (ARG236) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |TrmE GTPase domain |Thermotoga maritima [TaxId: 2336]
d1gaxa2 : (ALA225) (ARG236) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |Valyl-tRNA synthetase (ValRS) |Thermus thermophilus [TaxId: 274]
d2fv5a_ : (GLU280) (VAL332) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1atzb_ : (ASN1084) (SER1110) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d4pkba_ : (ASN315) (ALA381) [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
d3exeb1 : (LYS22) (TYR47) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3t2ca_ : (HIS176) (THR197) [view usage] : d.280.1.1 |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |automated matches |Thermoproteus neutrophilus [TaxId: 444157]
d1s7ia_ : (GLY85) (GLY111) [view usage] : d.58.4.9 |Ferredoxin-like |Dimeric alpha+beta barrel |DGPF domain (Pfam 04946) |Hypothetical protein PA1349 |Pseudomonas aeruginosa [TaxId: 287]
d4eh1b2 : (PRO117) (GLN140) [view usage] : c.25.1.0 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d1tuef_ : (ASN478) (ILE501) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Replication protein E1 helicase domain |Human papillomavirus type 18 [TaxId: 333761]
d2nyha1 : (TYR59) (ASN78) [view usage] : d.58.55.1 |Ferredoxin-like |DOPA-like |DOPA dioxygenase-like |Putative dioxygenase BxeB0224 |Burkholderia xenovorans [TaxId: 36873]
d1oiza2 : (ARG221) (PHE237) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Alpha-tocopherol transfer protein |Human (Homo sapiens) [TaxId: 9606]
d1z6aa3 : (ASP536) (VAL554) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d3t2da_ : (HIS176) (THR197) [view usage] : d.280.1.1 |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |automated matches |Thermoproteus neutrophilus [TaxId: 444157]
d2oplb1 : (ARG139) (ALA174) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein GSU2788 |Geobacter sulfurreducens [TaxId: 35554]
d1xx5a1 : (ILE71) (VAL120) [view usage] : d.111.1.1 |PR-1-like |PR-1-like |PR-1-like |automated matches |Chinese cobra (Naja atra) [TaxId: 8656]
d4o98a_ : (GLN240) (THR285) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas oleovorans [TaxId: 301]
d1oxwb_ : (ASN1315) (ASN1382) [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
d1xrja_ : (ASP130) (LEU148) [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |Uridine-cytidine kinase 2 |Human (Homo sapiens) [TaxId: 9606]
d1yj5a1 : (GLY164) (GLY209) [view usage] : c.108.1.9 |HAD-like |HAD-like |phosphatase domain of polynucleotide kinase |5' polynucleotide kinase-3' phosphatase, middle domain |Mouse (Mus musculus) [TaxId: 10090]
d2h19b_ : (GLY64) (GLY95) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thiol-disulfide oxidoreductase ResA |Bacillus subtilis [TaxId: 1423]
d3drea1 : (GLY73) (ASP95) [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4rpna_ : (GLN277) (ILE299) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Sphingobium chlorophenolicum [TaxId: 46429]
d3w68c2 : (ILE222) (PHE237) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3w67a2 : (ILE222) (PHE237) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1t0ia_ : (MET1) (GLN36) [view usage] : c.23.5.4 |Flavodoxin-like |Flavoproteins |NADPH-dependent FMN reductase |Hypothetical protein Ylr011wp |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2odkd_ : (HIS0) (ILE21) [view usage] : d.306.1.1 |YefM-like |YefM-like |YefM-like |Hypothetical protein NE2111 |Nitrosomonas europaea [TaxId: 915]
d3lx9a1 : (ASN224) (ALA257) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d2ecpa_ : (PHE450) (TRP475) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d1oipa2 : (ILE222) (PHE237) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Alpha-tocopherol transfer protein |Human (Homo sapiens) [TaxId: 9606]
d3daoa_ : (PHE150) (TRP170) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Eubacterium rectale
d4k3fa_ : (LYS169) (VAL185) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3izbt_ : (GLY43) (LYS80) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1evya2 : (GLU87) (GLN117) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Glycerol-3- phosphate dehydrogenase |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d4n5za_ : (GLY55) (ILE80) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1r5la2 : (ILE222) (PHE237) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Alpha-tocopherol transfer protein |Human (Homo sapiens) [TaxId: 9606]
d3raja_ : (ILE122) (ARG140) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |Human (Homo sapiens) [TaxId: 9606]
d3hg3a1 : (ASN224) (ALA257) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d4pk9a_ : (ASN315) (ASN382) [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.19, c.69, c.94, c.2, d.58, i.1, c.108, d.157, d.92, c.45, c.23, c.37, c.36, c.47, c.87, c.62, c.13, c.25, c.19,
d.111, a.83, b.51, d.227, d.306, d.280