Tableau information
Concept source: d4au9a_ amino acid (a.a.) range (GLN20)(VAL47)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN20) (ASP31) E1
(PRO32) (ILE43) H2
(ILE43) (VAL47) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -146.8° H2
H3 -144.6° -40.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1qxta_ : (LEU119) (HIS139) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |Green fluorescent protein, GFP |Jellyfish (Aequorea victoria) [TaxId: 6100]
d1ynjd1 : (ARG1184) (GLU1231) [view usage] : e.29.1.2 |beta and beta-prime subunits of DNA dependent RNA-polymerase |beta and beta-prime subunits of DNA dependent RNA-polymerase |RNA-polymerase beta-prime |RNA-polymerase beta-prime |Thermus aquaticus [TaxId: 271]
d1klna1 : (VAL385) (ASP411) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
d2r96a_ : (GLY160) (LEU195) [view usage] : c.23.5.8 |Flavodoxin-like |Flavoproteins |WrbA-like |Trp repressor binding protein WrbA |Escherichia coli [TaxId: 562]
d2zkia_ : (GLY73) (ASN103) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d3w01a_ : (PHE78) (THR103) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |PcrB protein homolog YerE |Staphylococcus aureus [TaxId: 418127]
d2qfwf_ : (VAL12) (LEU36) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3nvsa_ : (VAL163) (ALA184) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 666]
d2zava_ : (LEU118) (VAL165) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2uxqc_ : (VAL10) (ASP35) [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Desulfotalea psychrophila [TaxId: 84980]
d1frva_ : (SER8) (TYR31) [view usage] : e.19.1.1 |HydA/Nqo6-like |HydA/Nqo6-like |Nickel-iron hydrogenase, small subunit |Nickel-iron hydrogenase, small subunit |Desulfovibrio gigas [TaxId: 879]
d2h03a_ : (THR1679) (SER1718) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bkaa1 : (LEU112) (ASN137) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d3zvjl_ : (TYR34) (ARG65) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d3prld_ : (ILE211) (ASP233) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d3uqys_ : (PRO8) (LEU31) [view usage] : e.19.1.0 |HydA/Nqo6-like |HydA/Nqo6-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3ti2b_ : (GLY161) (ALA184) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 243277]
d2qfvb_ : (GLN9) (LEU36) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3uses_ : (PRO8) (LEU31) [view usage] : e.19.1.0 |HydA/Nqo6-like |HydA/Nqo6-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3ti2d_ : (GLY161) (ALA184) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 243277]
d1kfda1 : (VAL385) (ASP411) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
d3ti2c_ : (GLY161) (ALA184) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 243277]
d3gfvb_ : (LYS36) (ASP74) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d2cdqa1 : (ARG268) (GLN289) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3aaaa_ : (VAL216) (ARG259) [view usage] : e.43.1.1 |Subunits of heterodimeric actin filament capping protein Capz |Subunits of heterodimeric actin filament capping protein Capz |Capz alpha-1 subunit |Capz alpha-1 subunit |Chicken (Gallus gallus) [TaxId: 9031]
d2bspa_ : (VAL32) (PRO53) [view usage] : b.80.1.1 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate lyase-like |Pectate lyase |Bacillus subtilis [TaxId: 1423]
d1tlba_ : (GLY210) (ARG246) [view usage] : d.248.1.1 |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ti3a_ : (GLU3) (SER25) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |European aspen (Populus tremula), thioredoxin H [TaxId: 113636]
d2qfwa_ : (VAL12) (LEU36) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2qfwe_ : (VAL12) (LEU36) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2qfwd_ : (VAL12) (LEU36) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4ja8a_ : (LYS48) (VAL75) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cmjb_ : (VAL10) (VAL35) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2oc6b_ : (LEU89) (SER118) [view usage] : d.198.4.1 |Secretion chaperone-like |YdhG-like |YdhG-like |Uncharacterized protein YdhG |Bacillus subtilis [TaxId: 1423]
d2zkid_ : (GLY73) (ASN103) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.1, c.94, d.68, d.58, c.82, c.92, c.77, c.45, c.42, c.23, c.47, c.55, d.248, c.73, e.43, e.19, d.198, d.22, e.29