Tableau information
Concept source: d1wc1b_ amino acid (a.a.) range (THR1012)(GLN1052)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR1012) (ILE1018) E1
(PHE1021) (ALA1027) H2
(GLN1029) (GLN1052) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 37.2° H2
H3 156.2° 143.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wc0a_ : (THR1012) (GLN1052) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d1wc4a_ : (THR1012) (GLN1052) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d4koqa_ : (GLU161) (LYS178) [view usage] : d.18.1.2 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |Plant transcriptional regulator PBF-2 |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1qhma_ : (LYS1427) (SER1505) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d1tyga_ : (ASP302) (GLY337) [view usage] : c.1.31.1 |TIM beta/alpha-barrel |ThiG-like |ThiG-like |Thiazole biosynthesis protein ThiG |Bacillus subtilis [TaxId: 1423]
d2zkrx1 : (ARG23) (GLY58) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Dog (Canis familiaris) [TaxId: 9615]
d1fx2a_ : (THR901) (LYS940) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Receptor-type monomeric adenylyl cyclase |Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]
d1dgqa_ : (SER176) (LYS197) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d3n76a_ : (ILE4) (LEU43) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3ndoa_ : (THR125) (GLY155) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 1772]
d1c8ha_ : (ARG81) (ASP99) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |Parvovirus (panleukopenia virus) capsid protein |Canine parvovirus [TaxId: 10788]
d3pzsa_ : (LYS215) (GLY261) [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Yersinia pestis [TaxId: 214092]
d3d5ua_ : (LYS62) (LEU94) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1fx4a_ : (THR889) (GLU928) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Receptor-type monomeric adenylyl cyclase |Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]
d1stza2 : (ARG230) (GLN260) [view usage] : d.110.2.3 |Profilin-like |GAF domain-like |HrcA C-terminal domain-like |Heat-inducible transcription repressor HrcA, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1wc0b_ : (THR1012) (GLN1052) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d3pzsb_ : (LYS215) (GLY261) [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Yersinia pestis [TaxId: 214092]
d1zr5a1 : (LYS305) (MET340) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |Histone macro-H2a1.1 |Human (Homo sapiens) [TaxId: 9606]
d1wc5c_ : (THR1012) (GLN1052) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d1stzb2 : (ARG230) (GLN260) [view usage] : d.110.2.3 |Profilin-like |GAF domain-like |HrcA C-terminal domain-like |Heat-inducible transcription repressor HrcA, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1r8wa_ : (SER448) (GLU515) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Glycerol dehydratase DhaB1 |Clostridium butyricum [TaxId: 1492]
d4luja_ : (PRO182) (ILE198) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1a23a_ : (LYS158) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d1to3a_ : (SER247) (LYS290) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Putative aldolase YihT |Salmonella typhimurium [TaxId: 90371]
d2bera3 : (ASN310) (VAL330) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
d1wc1a_ : (THR1012) (GLN1052) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d1egme_ : (GLU62) (GLY99) [view usage] : c.51.3.1 |Anticodon-binding domain-like |B12-dependent dehydatase associated subunit |Diol dehydratase, beta subunit |Diol dehydratase, beta subunit |Klebsiella oxytoca [TaxId: 571]
d1peua2 : (HIS465) (GLY517) [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Salmonella typhimurium [TaxId: 90371]
d2qwza_ : (GLY33) (ALA71) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Silicibacter sp. [TaxId: 292414]
d1wc1b_ : (THR1012) (GLN1052) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d2flic_ : (THR3) (GLU27) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d1a19a_ : (LYS1) (ALA25) [view usage] : c.9.1.1 |Barstar-like |Barstar-related |Barstar-related |Barstar (barnase inhibitor) |Bacillus amyloliquefaciens [TaxId: 1390]
d1mzoa_ : (ALA272) (VAL315) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d1cm5a_ : (ALA272) (VAL315) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, c.1, d.58, i.1, c.72, c.23, d.144, c.7, c.47, b.121, c.62, d.110, d.38, c.51, c.50, c.9, d.18