Tableau information
Concept source: d1hdia_ amino acid (a.a.) range (SER389)(LEU413)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER389) (GLY394) E1
(GLY394) (GLY404) H2
(LEU407) (LEU413) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 107.9° H2
H3 100.4° -76.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2p5xa_ : (GLU187) (LEU211) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xxxa_ : (ASP760) (TRP799) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4nf8b_ : (THR242) (LEU278) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3c31a_ : (ASP212) (ARG252) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4av7a1 : (VAL202) (TYR233) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
d1ycja1 : (ASP760) (TRP799) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR5 [TaxId: 10116]
d1b6fa_ : (PHE3) (LYS32) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |Major tree pollen allergen |White birch (Betula verrucosa), Bet v 1 [TaxId: 3505]
d2xxwb_ : (ASP760) (ARG800) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2bmoa2 : (GLY177) (VAL207) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Nitrobenzene dioxygenase alpha subunit, NBDO-alpha |Comamonas sp. JS765 [TaxId: 58226]
d1cwsa_ : (LEU398) (ILE417) [view usage] : c.46.1.1 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Cell cycle control phosphatase, catalytic domain |CDC25b |Human (Homo sapiens) [TaxId: 9606]
d2ieea_ : (ASP201) (ASN246) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3tl1a_ : (GLY3) (PHE32) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d1ltkb_ : (SER389) (LEU413) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d4husa_ : (ALA85) (MET107) [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d3emva_ : (ASP207) (LEU246) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Plasmodium vivax [TaxId: 5855]
d2wkya_ : (ASP212) (ARG252) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2lhaa_ : (ILE401) (VAL419) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |Synaptogamin I |Human (Homo sapiens) [TaxId: 9606]
d1ycjb_ : (ASP760) (ARG800) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3glsd_ : (ALA252) (ASP275) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1krma_ : (LYS6) (GLY32) [view usage] : c.1.9.1 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Adenosine/AMP deaminase |Adenosine deaminase (ADA) |Cow (Bos taurus) [TaxId: 9913]
d2y43a_ : (ASP71) (PHE95) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vjta2 : (ASN215) (GLU238) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |Putative alpha-glucosidase TM0752 |Thermotoga maritima [TaxId: 2336]
d1uqra_ : (LYS3) (GLY24) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Actinobacillus pleuropneumoniae [TaxId: 715]
d2pcsa1 : (LEU1) (CYS29) [view usage] : d.129.3.10 |TBP-like |Bet v1-like |CoxG-like |Hypothetical protein GKP20 |Geobacillus kaustophilus [TaxId: 1462]
d4ctha_ : (GLU341) (TYR361) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4v06b_ : (GLN300) (LEU344) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qica1 : (VAL200) (HIS218) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3u94c_ : (ASP211) (TRP249) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3glsb_ : (ALA252) (ASP275) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hcuc_ : (ASN93) (LEU123) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Trichoderma reesei [TaxId: 51453]
d4g8na_ : (ASP213) (TRP251) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1noya_ : (THR36) (GLY52) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage T4 [TaxId: 10665]
d3gbba_ : (ASP212) (ARG252) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ltkc_ : (SER389) (LEU413) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3h1vx1 : (VAL200) (HIS218) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Glucokinase |Human (Homo sapiens) [TaxId: 9606]
d1ggga_ : (GLU181) (GLY222) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamine-binding protein |Escherichia coli [TaxId: 562]
d1xdfa1 : (GLY1) (VAL34) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |Plant pathogenesis-related protein PR10 |Yellow lupine (Lupinus luteus) [TaxId: 3873]
d3ni8a_ : (MET19) (ARG49) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d4ahia_ : (ASP41) (ASN63) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d2f36b_ : (ASP212) (ARG252) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2xxub_ : (ASP760) (ARG800) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1rzua_ : (ALA209) (GLY227) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
d3awqa_ : (GLY150) (SER174) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
d2xxvb_ : (ASP760) (TRP799) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1mwka1 : (LYS141) (LEU157) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Plasmid segregation protein ParM |Escherichia coli [TaxId: 562]
d1s7ya_ : (ASP213) (ARG253) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4mf3a_ : (ASP213) (ARG253) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4e0xa_ : (ASP212) (ARG252) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4qfib_ : (GLU41) (GLY61) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1tw0b_ : (GLY1) (LYS32) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |automated matches |Pachyrhizus erosus [TaxId: 109171]
d1v6za2 : (THR200) (GLY227) [view usage] : c.116.1.5 |alpha/beta knot |alpha/beta knot |YggJ C-terminal domain-like |Hypothetical protein TTHA0657 (TT1575) |Thermus thermophilus [TaxId: 274]
d1ltka_ : (SER389) (LEU413) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2i0ca_ : (ASP213) (TRP251) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2k5ga1 : (SER20) (TRP47) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Uncharacterized protein BPP1335 |Bordetella parapertussis [TaxId: 519]
d1grja1 : (GLN2) (GLY40) [view usage] : a.2.1.1 |Long alpha-hairpin |GreA transcript cleavage protein, N-terminal domain |GreA transcript cleavage protein, N-terminal domain |GreA transcript cleavage protein, N-terminal domain |Escherichia coli [TaxId: 562]
d3rysb_ : (PRO14) (GLY39) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Arthrobacter aurescens [TaxId: 290340]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.81, c.94, a.104, c.56, d.157, a.102, d.92, d.129, c.23, d.178, c.55, c.86, c.87, c.31, c.116, c.51, d.5, d.162, b.7,
c.46, a.2, g.44