Tableau information
Concept source: d4uyba2 amino acid (a.a.) range (PRO97)(ARG141)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO97) (ILE103) E1
(ASP107) (SER114) H2
(THR116) (ARG141) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -106.1° H2
H3 152.6° 99.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1xova2 : (THR136) (GLY173) [view usage] : c.56.5.6 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |N-acetylmuramoyl-L-alanine amidase-like |Endolysin Ply, catalytic domain |Bacteriophage Psa [TaxId: 171618]
d2qeel_ : (ARG164) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d2owna2 : (THR159) (PRO192) [view usage] : d.38.1.8 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |Acyl-ACP thioesterase-like |Putative oleoyl-ACP thioesterase LP0708 |Lactobacillus plantarum [TaxId: 1590]
d2d5ra1 : (SER93) (GLU128) [view usage] : c.55.3.9 |Ribonuclease H-like motif |Ribonuclease H-like |CAF1-like ribonuclease |CCR4-NOT transcription complex subunit 7, CAF1 |Human (Homo sapiens) [TaxId: 9606]
d1yfja1 : (PHE167) (GLY204) [view usage] : c.66.1.28 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |N6 adenine-specific DNA methylase, DAM |DNA methylase T4DAM |Bacteriophage T4 [TaxId: 10665]
d3dc7b_ : (PRO176) (SER222) [view usage] : c.23.10.9 |Flavodoxin-like |SGNH hydrolase |BT2961-like |automated matches |Lactobacillus plantarum [TaxId: 1590]
d1o6ua3 : (PRO97) (GLY143) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Supernatant protein factor (SPF), middle domain |Human (Homo sapiens) [TaxId: 9606]
d1ac5a_ : (ASP112) (PHE162) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |Serine carboxypeptidase II |Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
d1egib_ : (LYS693) (CYS735) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Macrophage mannose receptor, CRD4 |Human (Homo sapiens) [TaxId: 9606]
d1rp8a2 : (HIS1) (VAL27) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Plant alpha-amylase |Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
d1iiba_ : (LYS74) (ALA105) [view usage] : c.44.2.1 |Phosphotyrosine protein phosphatases I-like |PTS system IIB component-like |PTS system, Lactose/Cellobiose specific IIB subunit |Enzyme IIB-cellobiose |Escherichia coli [TaxId: 562]
d3cgwa_ : (LYS215) (GLN253) [view usage] : c.143.1.1 |CofD-like |CofD-like |CofD-like |LPPG:FO 2-phospho-L-lactate transferase CofD |Methanosarcina mazei [TaxId: 2209]
d2pnkl_ : (ARG164) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d3gp5a_ : (ARG88) (TRP113) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1olma3 : (PRO97) (GLY143) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Supernatant protein factor (SPF), middle domain |Human (Homo sapiens) [TaxId: 9606]
d1ht6a2 : (HIS1) (VAL27) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Plant alpha-amylase |Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
d3i5va_ : (LYS11) (SER40) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 561307]
d3fixb_ : (ILE3) (ASN60) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Thermoplasma acidophilum [TaxId: 2303]
d2gi4a_ : (LYS106) (LEU149) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
d3ea0a_ : (SER84) (ALA113) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Chlorobium tepidum [TaxId: 194439]
d2pnka1 : (ARG164) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d3dc7c_ : (PRO176) (SER222) [view usage] : c.23.10.9 |Flavodoxin-like |SGNH hydrolase |BT2961-like |automated matches |Lactobacillus plantarum [TaxId: 1590]
d1s1if_ : (TYR132) (VAL190) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3edda2 : (ALA108) (HIS153) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Flavobacterium sp. [TaxId: 197856]
d3ur8a_ : (LYS111) (GLY147) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d3lhla_ : (VAL255) (LYS292) [view usage] : c.42.1.0 |Arginase/deacetylase |Arginase/deacetylase |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d2ox6c_ : (VAL130) (LEU166) [view usage] : a.35.1.6 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |YdiL-like |Hypothetical protein SO3848 |Shewanella oneidensis [TaxId: 70863]
d4e2fa2 : (MET261) (VAL303) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d4lx9a_ : (ASP60) (GLY99) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d3p5mb_ : (ALA118) (ALA156) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d1eggb_ : (LYS693) (CYS735) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Macrophage mannose receptor, CRD4 |Human (Homo sapiens) [TaxId: 9606]
d1ztvb_ : (MET1) (SER28) [view usage] : c.1.32.1 |TIM beta/alpha-barrel |TM1631-like |TM1631-like |automated matches |Enterococcus faecalis [TaxId: 226185]
d2pnkd_ : (ARG164) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d2p51a_ : (THR104) (GLU138) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d3bsha1 : (HIS1) (VAL27) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
d2ox6d_ : (VAL130) (LEU166) [view usage] : a.35.1.6 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |YdiL-like |Hypothetical protein SO3848 |Shewanella oneidensis [TaxId: 70863]
d3hk8a_ : (ARG164) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d3i5vc_ : (LYS11) (SER40) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 561307]
d3ld6b_ : (PRO62) (LYS91) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gp5b_ : (ASN137) (THR173) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.69, a.104, i.1, c.56, c.66, c.14, c.42, c.23, c.37, c.55, d.151, d.169, c.60, c.13, c.78, d.108, d.38, c.44,
a.35, c.143