Tableau information
Concept source: d4klca_ amino acid (a.a.) range (VAL257)(GLU292)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL257) (HIS263) E1
(PRO266) (ARG272) H2
(TYR276) (GLU292) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 88.6° H2
H3 152.2° -86.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3r3uc_ : (ASP270) (SER299) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d1muwa_ : (PRO86) (LEU128) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces olivochromogenes [TaxId: 1963]
d3dahc1 : (ASP55) (MET74) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1zbqa1 : (ARG248) (ASP278) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Peroxisomal multifunctional enzyme type 2 |Human (Homo sapiens) [TaxId: 9606]
d3v4ma_ : (GLU376) (GLY410) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2avna1 : (GLY192) (ASP228) [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical methyltransferase TM1389 |Thermotoga maritima [TaxId: 2336]
d4fxwa_ : (GLU376) (CYS406) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor U2AF 65 KDa subunit |Human (Homo sapiens) [TaxId: 9606]
d2hsja1 : (THR56) (LEU78) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Uncharacterized protein SP1450 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1ji3a_ : (GLY346) (LEU386) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase L1 |Bacillus stearothermophilus, P1 [TaxId: 1422]
d2b2ta1 : (MSE20) (PHE49) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |ATP-dependent helicase CHD1 (Chromo domain protein 1) |Human (Homo sapiens) [TaxId: 9606]
d2o6tc_ : (LEU13) (GLY53) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical thioesterase PA5185 |Pseudomonas aeruginosa [TaxId: 287]
d2hsjb_ : (THR56) (LEU78) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Uncharacterized protein SP1450 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1w1oa2 : (GLY161) (VAL198) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Cytokinin dehydrogenase 1 |Maize (Zea mays) [TaxId: 4577]
d2qtgb_ : (PRO216) (ASN260) [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1tued_ : (ASN478) (ILE501) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Replication protein E1 helicase domain |Human papillomavirus type 18 [TaxId: 333761]
d2z1aa1 : (ALA335) (THR367) [view usage] : d.114.1.1 |5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |Thermus thermophilus [TaxId: 274]
d2b2va2 : (MET20) (GLU50) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |ATP-dependent helicase CHD1 (Chromo domain protein 1) |Human (Homo sapiens) [TaxId: 9606]
d2dsna_ : (GLY346) (LEU386) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Geobacillus zalihae [TaxId: 213419]
d1ktba2 : (GLY12) (GLU47) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Chicken (Gallus gallus) [TaxId: 9031]
d1ldma1 : (LYS90) (SER128) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Dogfish (Squalus acanthias) [TaxId: 7797]
d1efca3 : (THR167) (SER197) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Elongation factor Tu (EF-Tu), N-terminal (G) domain |Escherichia coli [TaxId: 562]
d1psza_ : (ASP114) (ASP162) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Pneumococcal surface antigen PssA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2h8gb_ : (PRO216) (ASN260) [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1jmko_ : (GLY196) (THR229) [view usage] : c.69.1.22 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Thioesterase domain of polypeptide, polyketide and fatty acid synthases |Surfactin synthetase, SrfA |Bacillus subtilis [TaxId: 1423]
d2qkna1 : (GLY161) (VAL198) [view usage] : d.145.1.0 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
d3u0oa2 : (LYS173) (ARG208) [view usage] : d.139.1.0 |PurM C-terminal domain-like |PurM C-terminal domain-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2b2uc1 : (MET20) (PHE49) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |ATP-dependent helicase CHD1 (Chromo domain protein 1) |Human (Homo sapiens) [TaxId: 9606]
d1jwqa_ : (MET136) (ASP177) [view usage] : c.56.5.6 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase CwlV |Paenibacillus polymyxa [TaxId: 1406]
d2z5ga_ : (GLY346) (SER385) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Geobacillus zalihae [TaxId: 213419]
d1o1ha_ : (PRO86) (GLY129) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1a2yc_ : (GLY71) (VAL99) [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
d2c31a2 : (PRO100) (CYS133) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
d4pe3a_ : (HIS256) (GLY310) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 349101]
d3r3ua_ : (ASP270) (SER299) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d3v4mb_ : (GLU376) (CYS406) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1weya_ : (SER6) (GLU28) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Calcipressin-1 |Mouse (Mus musculus) [TaxId: 10090]
d1hi9a_ : (MET1) (SER49) [view usage] : c.99.1.1 |Dipeptide transport protein |Dipeptide transport protein |Dipeptide transport protein |Zn-dependent D-aminopeptidase DppA |Bacillus subtilis [TaxId: 1423]
d4rn7a_ : (PRO256) (GLY299) [view usage] : c.56.5.0 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |automated matches |automated matches |Peptoclostridium difficile [TaxId: 272563]
d2guba_ : (PRO87) (GLY130) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |automated matches |Streptomyces rubiginosus [TaxId: 1929]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.94, c.2, d.58, c.56, c.92, c.66, c.23, c.37, c.36, d.2, d.38, c.61, b.34, d.145, d.139, c.99, d.114