Tableau information
Concept source: d3mpzb_ amino acid (a.a.) range (LEU50)(GLY77)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU50) (ALA54) E1
(ALA54) (GLY66) H2
(VAL71) (GLY77) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -76.7° H2
E3 110.5° 142.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4gria1 : (PRO183) (ALA215) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Borrelia burgdorferi [TaxId: 224326]
d2uz5a_ : (GLY72) (PRO104) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Legionella pneumophila [TaxId: 446]
d1pd5j_ : (GLY7) (VAL37) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d3ai1a_ : (LYS225) (ASP256) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Gluconobacter frateurii [TaxId: 38308]
d2iyca_ : (GLY553) (PHE587) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 1 |Human (Homo sapiens) [TaxId: 9606]
d1qs0a_ : (SER104) (THR132) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |2-oxoisovalerate dehydrogenase (E1B), PP module |Pseudomonas putida [TaxId: 303]
d3dkca_ : (THR1173) (GLU1214) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Hepatocyte growth factor receptor, c-MET |Human (Homo sapiens) [TaxId: 9606]
d3mdqa2 : (GLN205) (SER239) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cytophaga hutchinsonii [TaxId: 269798]
d2kgja_ : (GLY53) (SER81) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d3m3ta_ : (HIS134) (ASN151) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d1mlyb_ : (GLY82) (ASP110) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA |Escherichia coli [TaxId: 562]
d2vmga1 : (HIS84) (VAL104) [view usage] : b.18.1.33 |Galactose-binding domain-like |Galactose-binding domain-like |NPCBM-like |Uncharacterized Protein CPF2129 |Clostridium perfringens [TaxId: 1502]
d4p7xa_ : (GLY7) (MET44) [view usage] : b.82.2.0 |Double-stranded beta-helix |Clavaminate synthase-like |automated matches |automated matches |Rhizobium loti [TaxId: 266835]
d1fwxd2 : (GLU219) (ASP252) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
d3ri0a_ : (ASP83) (VAL106) [view usage] : d.116.1.0 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2qcya_ : (HIS134) (ASN151) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d1u05a_ : (ASP188) (GLY212) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein yfiH |Shigella flexneri [TaxId: 623]
d1t6ca2 : (ASP204) (TYR238) [view usage] : c.55.1.8 |Ribonuclease H-like motif |Actin-like ATPase domain |Ppx/GppA phosphatase |Exopolyphosphatase Ppx |Aquifex aeolicus [TaxId: 63363]
d4mqrb_ : (GLY94) (ASP122) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2fffb1 : (GLY559) (GLN582) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 1b, transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2q5we_ : (HIS1) (TRP39) [view usage] : d.41.5.0 |alpha/beta-Hammerhead |Molybdopterin synthase subunit MoaE |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1zm1a_ : (VAL119) (TRP141) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Fibrobacter succinogenes [TaxId: 833]
d1zbma1 : (GLY153) (GLY175) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Hypothetical protein AF1704 |Archaeoglobus fulgidus [TaxId: 2234]
d1ydfa1 : (THR69) (GLY94) [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |Putative hydrolase SP1407 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1xfja_ : (ASP200) (ARG227) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein CC0490 |Caulobacter crescentus [TaxId: 155892]
d2gaea1 : (PRO263) (ASP299) [view usage] : b.52.1.4 |Double psi beta-barrel |Barwin-like endoglucanases |MLTA-like |Membrane-bound lytic murein transglycosylase A, MLTA |Escherichia coli [TaxId: 562]
d3a3ua_ : (GLY155) (GLY177) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Hypothetical protein TTHA1568 |Thermus thermophilus [TaxId: 274]
d2cdqa1 : (THR183) (THR213) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1fwxb2 : (GLU219) (ASP252) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
d1bpoa2 : (PRO6) (SER34) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3zvjm_ : (PRO99) (ASP130) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d2ouja_ : (SER11) (ARG42) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Thrombospondin 1 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d4qead_ : (ARG133) (ASN166) [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Brucella abortus [TaxId: 430066]
d2h7aa1 : (ALA54) (PRO87) [view usage] : d.350.1.1 |YcgL-like |YcgL-like |YcgL-like |Hypothetical protein YcgL |Escherichia coli [TaxId: 562]
d2auga_ : (GLY497) (ARG537) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vmia_ : (HIS957) (VAL977) [view usage] : b.18.1.33 |Galactose-binding domain-like |Galactose-binding domain-like |NPCBM-like |automated matches |Clostridium perfringens [TaxId: 1502]
d1ix5a_ : (GLU46) (ALA80) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Archaeal FKBP |Methanococcus thermolithotrophicus [TaxId: 2186]
d4inka_ : (SER3) (VAL28) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d4ocna_ : (GLU6) (VAL36) [view usage] : c.97.3.0 |Cytidine deaminase-like |JAB1/MPN domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d4glla_ : (GLU327) (GLU353) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2q6dc_ : (GLY132) (ILE150) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Infectious bronchitis virus [TaxId: 11120]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, b.82, c.67, c.94, c.2, b.69, c.108, b.29, c.26, b.47, d.144, c.36, c.47, c.55, b.18, d.194, d.3, d.116, c.97, c.43,
c.73, b.52, d.41, d.93, d.26, c.106, d.350